Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 RN7SL8P-201ENST00000461771 266 ntBASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 NPM1P43-201ENST00000558669 786 ntBASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 AC003102.2-201ENST00000589195 1469 ntBASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 LILRP1-201ENST00000444199 1370 ntBASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 CICP12-201ENST00000455801 843 ntBASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 RN7SL67P-201ENST00000492147 296 ntBASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 AC008723.1-201ENST00000506922 207 ntBASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 PGAM1P5-201ENST00000548011 764 ntBASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 AL157813.1-201ENST00000612996 587 ntBASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 AC136759.1-202ENST00000530858 2194 ntBASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 FRMPD2B-201ENST00000431305 1347 ntBASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC187A0A096LP49 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms