Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 MEX3B-202ENST00000558133 4333 ntBASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 AC004899.2-201ENST00000622993 3860 ntBASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 AC140113.2-201ENST00000604370 208 ntBASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 AC074044.1-201ENST00000609673 707 ntBASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 AC027601.4-201ENST00000611259 610 ntBASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 LINC00628-201ENST00000628516 1289 ntBASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV18A0A075B6X5 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms