Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 SPDYE17-201ENST00000412399 783 ntBASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 AC092580.3-201ENST00000430932 139 ntBASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 AL590560.3-201ENST00000623350 461 ntBASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
R3HCC1Q9Y3T6 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
R3HCC1Q9Y3T6 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
R3HCC1Q9Y3T6 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
R3HCC1Q9Y3T6 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
R3HCC1Q9Y3T6 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
R3HCC1Q9Y3T6 C2-206ENST00000442278 2434 ntTSL 2 BASIC17.27■□□□□ 0.35
R3HCC1Q9Y3T6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
R3HCC1Q9Y3T6 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
R3HCC1Q9Y3T6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 AL033527.5-202ENST00000641632 1098 ntBASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 BNIP3P1-202ENST00000550043 1585 ntBASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 AC130686.1-201ENST00000622936 2466 ntBASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3HCC1Q9Y3T6 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 CICP11-201ENST00000434745 2827 ntBASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 AC087499.5-201ENST00000452760 1342 ntBASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms