Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 AC012617.1-204ENST00000586340 2305 ntBASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 AC093909.1-201ENST00000504731 1122 ntBASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 RNA5SP419-201ENST00000515908 135 ntBASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 IGHV3-62-201ENST00000520057 340 ntBASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 RARRES2P9-201ENST00000565168 469 ntBASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 AC106730.1-201ENST00000566722 1090 ntBASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 AC015818.8-201ENST00000587907 1519 ntBASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 SPDYE17-201ENST00000412399 783 ntBASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 FAM86C2P-203ENST00000528684 1004 ntBASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms