Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A4Q9HBG4 AC023908.3-201ENST00000564211 3047 ntBASIC16.65■□□□□ 0.26
ATP6V0A4Q9HBG4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A4Q9HBG4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A4Q9HBG4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP6V0A4Q9HBG4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP6V0A4Q9HBG4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A4Q9HBG4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A4Q9HBG4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ATP6V0A4Q9HBG4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A4Q9HBG4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A4Q9HBG4 GRK6P1-201ENST00000400595 1711 ntBASIC16.65■□□□□ 0.26
ATP6V0A4Q9HBG4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ATP6V0A4Q9HBG4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.64■□□□□ 0.26
ATP6V0A4Q9HBG4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ATP6V0A4Q9HBG4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 AP000593.2-201ENST00000542775 1433 ntBASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 AC007969.1-201ENST00000433675 447 ntBASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 MTX1P1-201ENST00000440904 838 ntBASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 AL591846.1-201ENST00000451736 433 ntBASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 AC068587.10-201ENST00000641210 219 ntBASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 AC011840.2-201ENST00000563063 1520 ntBASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A4Q9HBG4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 PPY2P-201ENST00000582808 702 ntBASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP6V0A4Q9HBG4 ZACNP1-201ENST00000612259 710 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms