Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AL358472.3-201ENST00000608147 415 ntBASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.46■□□□□ 0.22
UBE2OQ9C0C9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
UBE2OQ9C0C9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
UBE2OQ9C0C9 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 RPL18AP3-201ENST00000462885 528 ntBASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 MIR3677-201ENST00000578964 60 ntBASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 AC087392.5-201ENST00000612517 489 ntBASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 AL603764.1-201ENST00000636452 321 ntBASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 FKBP4P6-201ENST00000457486 1332 ntBASIC16.45■□□□□ 0.22
UBE2OQ9C0C9 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 DDX39AP1-201ENST00000445147 1181 ntBASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 MESTP3-201ENST00000503460 968 ntBASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 DUX4L46-201ENST00000566845 751 ntBASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 AC018695.6-201ENST00000614011 534 ntBASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 CICP4-201ENST00000447359 2812 ntBASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 AC092384.3-202ENST00000564646 2873 ntBASIC16.44■□□□□ 0.22
UBE2OQ9C0C9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms