Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 NME2P1-201ENST00000426182 414 ntBASIC14.73□□□□□ -0.05
NPAS2Q99743 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NPAS2Q99743 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.73□□□□□ -0.05
NPAS2Q99743 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.73□□□□□ -0.05
NPAS2Q99743 AC093004.1-201ENST00000508850 424 ntBASIC14.73□□□□□ -0.05
NPAS2Q99743 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.73□□□□□ -0.05
NPAS2Q99743 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.73□□□□□ -0.05
NPAS2Q99743 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS2Q99743 AC027307.3-201ENST00000594262 1100 ntBASIC14.73□□□□□ -0.05
NPAS2Q99743 LINC01115-203ENST00000606068 577 ntBASIC14.73□□□□□ -0.05
NPAS2Q99743 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS2Q99743 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.73□□□□□ -0.05
NPAS2Q99743 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NPAS2Q99743 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS2Q99743 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.73□□□□□ -0.05
NPAS2Q99743 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.73□□□□□ -0.05
NPAS2Q99743 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS2Q99743 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
NPAS2Q99743 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.73□□□□□ -0.05
NPAS2Q99743 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NPAS2Q99743 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
NPAS2Q99743 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.72□□□□□ -0.05
NPAS2Q99743 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.72□□□□□ -0.05
NPAS2Q99743 AC063926.2-201ENST00000623766 1308 ntBASIC14.72□□□□□ -0.05
NPAS2Q99743 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.72□□□□□ -0.05
NPAS2Q99743 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.72□□□□□ -0.05
NPAS2Q99743 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.72□□□□□ -0.05
NPAS2Q99743 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.72□□□□□ -0.05
NPAS2Q99743 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NPAS2Q99743 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.72□□□□□ -0.05
NPAS2Q99743 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.72□□□□□ -0.05
NPAS2Q99743 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.72□□□□□ -0.05
NPAS2Q99743 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.72□□□□□ -0.05
NPAS2Q99743 TPRX2P-201ENST00000535362 881 ntBASIC14.72□□□□□ -0.05
NPAS2Q99743 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.72□□□□□ -0.05
NPAS2Q99743 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.72□□□□□ -0.05
NPAS2Q99743 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
NPAS2Q99743 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.72□□□□□ -0.05
NPAS2Q99743 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.72□□□□□ -0.05
NPAS2Q99743 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.72□□□□□ -0.05
NPAS2Q99743 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.72□□□□□ -0.05
NPAS2Q99743 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.72□□□□□ -0.05
NPAS2Q99743 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
NPAS2Q99743 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.72□□□□□ -0.05
NPAS2Q99743 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NPAS2Q99743 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.72□□□□□ -0.05
NPAS2Q99743 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 AC007787.1-201ENST00000588095 1583 ntBASIC14.72□□□□□ -0.05
NPAS2Q99743 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
NPAS2Q99743 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 AC089987.1-201ENST00000551654 2209 ntBASIC14.72□□□□□ -0.05
NPAS2Q99743 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NPAS2Q99743 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.72□□□□□ -0.05
NPAS2Q99743 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS2Q99743 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS2Q99743 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.71□□□□□ -0.05
NPAS2Q99743 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS2Q99743 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS2Q99743 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS2Q99743 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS2Q99743 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS2Q99743 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.71□□□□□ -0.05
NPAS2Q99743 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NPAS2Q99743 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
NPAS2Q99743 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS2Q99743 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.71□□□□□ -0.05
NPAS2Q99743 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS2Q99743 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.71□□□□□ -0.05
NPAS2Q99743 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS2Q99743 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS2Q99743 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS2Q99743 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.71□□□□□ -0.05
NPAS2Q99743 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.71□□□□□ -0.05
NPAS2Q99743 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.71□□□□□ -0.05
NPAS2Q99743 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
NPAS2Q99743 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.71□□□□□ -0.05
NPAS2Q99743 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS2Q99743 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS2Q99743 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS2Q99743 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms