Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
LITAFQ99732 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC9.95□□□□□ -0.82
LITAFQ99732 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC9.95□□□□□ -0.82
LITAFQ99732 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
LITAFQ99732 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 MIR346-201ENST00000362234 95 ntBASIC9.95□□□□□ -0.82
LITAFQ99732 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC9.95□□□□□ -0.82
LITAFQ99732 AC009947.1-201ENST00000444350 727 ntBASIC9.95□□□□□ -0.82
LITAFQ99732 PTK7-212ENST00000476760 902 ntTSL 2 BASIC9.95□□□□□ -0.82
LITAFQ99732 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC9.95□□□□□ -0.82
LITAFQ99732 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC9.95□□□□□ -0.82
LITAFQ99732 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC9.95□□□□□ -0.82
LITAFQ99732 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC9.95□□□□□ -0.82
LITAFQ99732 KRT19P2-202ENST00000557173 1012 ntBASIC9.95□□□□□ -0.82
LITAFQ99732 AP002472.1-201ENST00000577490 586 ntBASIC9.95□□□□□ -0.82
LITAFQ99732 AC068137.2-201ENST00000605408 478 ntBASIC9.95□□□□□ -0.82
LITAFQ99732 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC9.95□□□□□ -0.82
LITAFQ99732 AC004877.2-201ENST00000623941 599 ntBASIC9.95□□□□□ -0.82
LITAFQ99732 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC9.95□□□□□ -0.82
LITAFQ99732 BCAR1-209ENST00000546196 1340 ntBASIC9.95□□□□□ -0.82
LITAFQ99732 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
LITAFQ99732 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
LITAFQ99732 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
LITAFQ99732 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
LITAFQ99732 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
LITAFQ99732 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC9.95□□□□□ -0.82
LITAFQ99732 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC9.95□□□□□ -0.82
LITAFQ99732 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
LITAFQ99732 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC9.95□□□□□ -0.82
LITAFQ99732 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC9.95□□□□□ -0.82
LITAFQ99732 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC9.95□□□□□ -0.82
LITAFQ99732 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC9.95□□□□□ -0.82
LITAFQ99732 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
LITAFQ99732 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC9.95□□□□□ -0.82
LITAFQ99732 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 EML1-203ENST00000334192 4064 ntTSL 5 BASIC9.95□□□□□ -0.82
LITAFQ99732 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
LITAFQ99732 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
LITAFQ99732 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
LITAFQ99732 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
LITAFQ99732 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
LITAFQ99732 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
LITAFQ99732 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC9.94□□□□□ -0.82
LITAFQ99732 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LITAFQ99732 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC9.94□□□□□ -0.82
LITAFQ99732 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC9.94□□□□□ -0.82
LITAFQ99732 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LITAFQ99732 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC9.94□□□□□ -0.82
LITAFQ99732 CYP2AB1P-202ENST00000454440 1456 ntBASIC9.94□□□□□ -0.82
LITAFQ99732 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC9.94□□□□□ -0.82
LITAFQ99732 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms