Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 AC004066.1-201ENST00000502488 802 ntBASIC12.2□□□□□ -0.46
RAB40CQ96S21 AC005829.1-201ENST00000570002 483 ntBASIC12.2□□□□□ -0.46
RAB40CQ96S21 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 AC018529.1-201ENST00000613063 361 ntBASIC12.2□□□□□ -0.46
RAB40CQ96S21 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 AL121723.1-201ENST00000445194 1519 ntBASIC12.2□□□□□ -0.46
RAB40CQ96S21 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 CICP8-201ENST00000455800 2813 ntBASIC12.19□□□□□ -0.46
RAB40CQ96S21 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 AL592309.1-201ENST00000443127 649 ntBASIC12.19□□□□□ -0.46
RAB40CQ96S21 TIMM8BP1-201ENST00000452384 211 ntBASIC12.19□□□□□ -0.46
RAB40CQ96S21 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.19□□□□□ -0.46
RAB40CQ96S21 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RAB40CQ96S21 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB40CQ96S21 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB40CQ96S21 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms