Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 AL844908.2-201ENST00000609461 460 ntBASIC13.74□□□□□ -0.21
SNX18Q96RF0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 AC015909.5-201ENST00000624336 2266 ntBASIC13.74□□□□□ -0.21
SNX18Q96RF0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 AC100757.3-201ENST00000622361 1406 ntBASIC13.73□□□□□ -0.21
SNX18Q96RF0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 AC114501.2-201ENST00000439631 535 ntBASIC13.73□□□□□ -0.21
SNX18Q96RF0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 SAMD11P1-201ENST00000571429 661 ntBASIC13.73□□□□□ -0.21
SNX18Q96RF0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 AC105233.6-201ENST00000642093 218 ntBASIC13.73□□□□□ -0.21
SNX18Q96RF0 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 AC105206.1-202ENST00000314927 2368 ntBASIC13.73□□□□□ -0.21
SNX18Q96RF0 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
SNX18Q96RF0 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 AC011474.4-201ENST00000623523 2076 ntBASIC13.73□□□□□ -0.21
SNX18Q96RF0 BTBD7P1-201ENST00000447253 1453 ntBASIC13.73□□□□□ -0.21
SNX18Q96RF0 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX18Q96RF0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 AC007787.1-201ENST00000588095 1583 ntBASIC13.72□□□□□ -0.21
SNX18Q96RF0 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms