Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 AC007292.2-201ENST00000593524 1812 ntBASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 VDAC1P1-201ENST00000439229 848 ntBASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 AL133466.1-201ENST00000447582 150 ntBASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 SCARNA21-201ENST00000517026 139 ntBASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 AL109954.1-202ENST00000564051 2148 ntBASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 AL805961.1-203ENST00000641078 1258 ntBASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 ACE3P-201ENST00000423435 1973 ntBASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 AL008718.2-201ENST00000609206 1313 ntBASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC85AQ96PX6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 CICP12-201ENST00000455801 843 ntBASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 RN7SL720P-201ENST00000488178 304 ntBASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 AC024681.1-201ENST00000521917 487 ntBASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 SNORD3B-2-202ENST00000571722 791 ntBASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 AF254983.2-201ENST00000612331 135 ntBASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC85AQ96PX6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms