Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LRRC3BQ96PB8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC3BQ96PB8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC3BQ96PB8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRRC3BQ96PB8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.08■□□□□ 0.01
LRRC3BQ96PB8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LRRC3BQ96PB8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LRRC3BQ96PB8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRRC3BQ96PB8 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRRC3BQ96PB8 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
LRRC3BQ96PB8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LRRC3BQ96PB8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
LRRC3BQ96PB8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 MIR557-201ENST00000385239 98 ntBASIC15.08■□□□□ 0
LRRC3BQ96PB8 AL512430.1-201ENST00000392575 860 ntBASIC15.08■□□□□ 0
LRRC3BQ96PB8 TSPY25P-201ENST00000429463 745 ntBASIC15.08■□□□□ 0
LRRC3BQ96PB8 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 AC135983.4-201ENST00000564116 1262 ntBASIC15.08■□□□□ 0
LRRC3BQ96PB8 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 AC074138.1-201ENST00000611182 1303 ntBASIC15.08■□□□□ 0
LRRC3BQ96PB8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 AL109954.1-202ENST00000564051 2148 ntBASIC15.08■□□□□ 0
LRRC3BQ96PB8 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 AC092135.3-201ENST00000624151 1846 ntBASIC15.08■□□□□ 0
LRRC3BQ96PB8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 AC139712.1-201ENST00000378256 1875 ntBASIC15.08■□□□□ 0
LRRC3BQ96PB8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRC3BQ96PB8 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.08■□□□□ 0
LRRC3BQ96PB8 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC3BQ96PB8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC3BQ96PB8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.07■□□□□ 0
LRRC3BQ96PB8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC3BQ96PB8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.07■□□□□ 0
LRRC3BQ96PB8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC3BQ96PB8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC3BQ96PB8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.07■□□□□ 0
LRRC3BQ96PB8 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRC3BQ96PB8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC3BQ96PB8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRC3BQ96PB8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC3BQ96PB8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC3BQ96PB8 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
LRRC3BQ96PB8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC3BQ96PB8 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC3BQ96PB8 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC3BQ96PB8 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRC3BQ96PB8 RNA5SP359-201ENST00000364838 113 ntBASIC15.07■□□□□ 0
LRRC3BQ96PB8 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC3BQ96PB8 AP000356.3-201ENST00000382243 753 ntBASIC15.07■□□□□ 0
LRRC3BQ96PB8 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.07■□□□□ 0
LRRC3BQ96PB8 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.07■□□□□ 0
LRRC3BQ96PB8 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.07■□□□□ 0
LRRC3BQ96PB8 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.07■□□□□ 0
LRRC3BQ96PB8 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.07■□□□□ 0
LRRC3BQ96PB8 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.07■□□□□ 0
LRRC3BQ96PB8 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LRRC3BQ96PB8 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms