Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 AC105339.1-204ENST00000636249 355 ntBASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NSMCE2Q96MF7 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 CICP8-201ENST00000455800 2813 ntBASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 AL080243.2-201ENST00000418783 582 ntBASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 SPDYE14P-201ENST00000442619 822 ntBASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 TMEM198B-204ENST00000484016 896 ntBASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NSMCE2Q96MF7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 TCAM1P-207ENST00000485295 1537 ntBASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 AL137783.1-201ENST00000623494 1896 ntBASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 AL627223.1-201ENST00000416693 442 ntBASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 AC000095.1-201ENST00000603208 874 ntBASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms