Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 PPT1-213ENST00000641319 2388 ntBASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 AC009477.1-201ENST00000452936 217 ntBASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 DUX4L27-201ENST00000554796 1261 ntBASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 AL138799.1-201ENST00000448213 1675 ntBASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 VDAC1P7-201ENST00000462417 847 ntBASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 INVS-201ENST00000262456 2968 ntTSL 5 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CHAMP1Q96JM3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 OR2I1P-210ENST00000642037 4691 ntBASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 INE2-201ENST00000630399 1874 ntBASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 Z82170.1-201ENST00000625081 3192 ntBASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms