Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 AC126755.1-201ENST00000525846 6405 ntBASIC13.49□□□□□ -0.25
PTP4A1Q93096 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 AC008738.7-201ENST00000609744 511 ntBASIC13.49□□□□□ -0.25
PTP4A1Q93096 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 AL359881.3-201ENST00000602640 1721 ntBASIC13.49□□□□□ -0.25
PTP4A1Q93096 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 AC011474.4-201ENST00000623523 2076 ntBASIC13.49□□□□□ -0.25
PTP4A1Q93096 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PTP4A1Q93096 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PTP4A1Q93096 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PTP4A1Q93096 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PTP4A1Q93096 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PTP4A1Q93096 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PTP4A1Q93096 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PTP4A1Q93096 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PTP4A1Q93096 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PTP4A1Q93096 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PTP4A1Q93096 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PTP4A1Q93096 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 MRPS18AP1-201ENST00000414458 589 ntBASIC13.48□□□□□ -0.25
PTP4A1Q93096 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 SPDYE18-201ENST00000510091 1050 ntBASIC13.48□□□□□ -0.25
PTP4A1Q93096 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PTP4A1Q93096 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PTP4A1Q93096 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PTP4A1Q93096 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PTP4A1Q93096 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 AC107373.2-201ENST00000607735 490 ntBASIC13.48□□□□□ -0.25
PTP4A1Q93096 AL662799.1-202ENST00000614205 422 ntBASIC13.48□□□□□ -0.25
PTP4A1Q93096 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PTP4A1Q93096 AJ011932.1-201ENST00000621707 465 ntBASIC13.48□□□□□ -0.25
PTP4A1Q93096 AC004840.1-201ENST00000636359 365 ntBASIC13.48□□□□□ -0.25
PTP4A1Q93096 PRSS30P-206ENST00000641773 873 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms