Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH19Q8TAB3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PCDH19Q8TAB3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH19Q8TAB3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PCDH19Q8TAB3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH19Q8TAB3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH19Q8TAB3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH19Q8TAB3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 AC011840.2-201ENST00000563063 1520 ntBASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 MIR658-201ENST00000385210 100 ntBASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 AC234783.1-201ENST00000441761 496 ntBASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 USP32P1-208ENST00000506594 1164 ntBASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 RN7SL48P-201ENST00000579283 293 ntBASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 AC138696.2-201ENST00000607376 223 ntBASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 AC138466.3-201ENST00000619983 221 ntBASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 AC020910.5-201ENST00000623668 1865 ntBASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PCDH19Q8TAB3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 SLC25A47P1-201ENST00000531577 414 ntBASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 AC015936.2-201ENST00000593177 259 ntBASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH19Q8TAB3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms