Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AC025678.2-201ENST00000562061 970 ntBASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 AC010336.2-201ENST00000564226 506 ntBASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 AC051619.7-201ENST00000568314 623 ntBASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 AL138828.2-201ENST00000615812 383 ntBASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 SPDYE12P-201ENST00000618416 771 ntBASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 AC073592.8-201ENST00000624126 511 ntBASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 AC079781.4-201ENST00000641908 219 ntBASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 CICP20-201ENST00000443330 2801 ntBASIC13.26□□□□□ -0.29
DNAAF1Q8NEP3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 AL121723.1-201ENST00000445194 1519 ntBASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 LILRP1-201ENST00000444199 1370 ntBASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 TUBB3P1-201ENST00000405796 1332 ntBASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 TSEN15P1-201ENST00000423257 515 ntBASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.25□□□□□ -0.29
DNAAF1Q8NEP3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 AC087499.5-201ENST00000452760 1342 ntBASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 AC069120.2-201ENST00000524091 540 ntBASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 AC109322.1-201ENST00000524499 1264 ntBASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms