Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.33□□□□□ -0.11
ZNF248Q8NDW4 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF248Q8NDW4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 AL391280.1-201ENST00000506969 1062 ntBASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 BNIP3P13-201ENST00000599968 566 ntBASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 AL353770.1-201ENST00000614915 403 ntBASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 AL157791.1-201ENST00000553667 1699 ntBASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF248Q8NDW4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 NOC2LP1-201ENST00000450578 752 ntBASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 AC019193.1-201ENST00000506678 823 ntBASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 AL603764.1-201ENST00000636452 321 ntBASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 AC011491.1-203ENST00000637688 543 ntBASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms