Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 PUDPP3-201ENST00000445368 636 ntBASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 Z93015.1-201ENST00000451718 390 ntBASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 AL136301.1-201ENST00000615830 422 ntBASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 AP001002.3-201ENST00000623482 206 ntBASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 AL033527.4-201ENST00000641026 673 ntBASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRAM1L1Q8N609 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 AC010141.1-201ENST00000411585 623 ntBASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 RPL13AP20-201ENST00000459725 609 ntBASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 CICP24-201ENST00000605464 2705 ntBASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAM1L1Q8N609 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 SHC1P1-201ENST00000425230 1745 ntBASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 MTHFR-210ENST00000641407 2387 ntBASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 MTX1P1-201ENST00000440904 838 ntBASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 AC100850.1-201ENST00000506768 649 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms