Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LTBP4Q8N2S1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LTBP4Q8N2S1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LTBP4Q8N2S1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.82■□□□□ 0.76
LTBP4Q8N2S1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LTBP4Q8N2S1 AC092127.1-201ENST00000567093 3455 ntBASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 RPSAP6-201ENST00000417882 882 ntBASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LTBP4Q8N2S1 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 PGK1P2-201ENST00000431702 1214 ntBASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 AC008021.1-201ENST00000474180 414 ntBASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 AC112250.1-201ENST00000504640 745 ntBASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 AC005332.2-201ENST00000590010 930 ntBASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 ACTBP14-201ENST00000411655 1089 ntBASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 AC010086.2-201ENST00000428616 226 ntBASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 AC005722.1-201ENST00000431878 964 ntBASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 RNA5SP420-201ENST00000516997 137 ntBASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.8■□□□□ 0.76
LTBP4Q8N2S1 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 AL031590.1-202ENST00000641466 1737 ntBASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 AC092115.1-201ENST00000566277 1402 ntBASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 PCDHGB8P-201ENST00000502926 1973 ntBASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 PAX6-247ENST00000638965 979 ntTSL 5 BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTBP4Q8N2S1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms