Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AL135901.1-201ENST00000451812 333 ntBASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 AC021016.3-201ENST00000608367 477 ntBASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 CCT8L1P-201ENST00000465400 1674 ntBASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 AL672207.1-201ENST00000328462 1570 ntBASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 KRT18P46-201ENST00000435568 1279 ntBASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 AC006529.1-201ENST00000459978 637 ntBASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 AC064801.2-201ENST00000625052 1303 ntBASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 BAK1P1-201ENST00000317045 636 ntBASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 AC013553.1-201ENST00000560906 267 ntBASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL27A1Q8IZC6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 RN7SL788P-201ENST00000460504 316 ntBASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 AC024293.1-201ENST00000467930 498 ntBASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 AP003398.1-201ENST00000531124 318 ntBASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 AL451007.2-201ENST00000632004 563 ntBASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 KRT8P43-201ENST00000406052 1458 ntBASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms