Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RAB43Q86YS6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB43Q86YS6 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB43Q86YS6 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB43Q86YS6 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB43Q86YS6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB43Q86YS6 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RAB43Q86YS6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB43Q86YS6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RAB43Q86YS6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB43Q86YS6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB43Q86YS6 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
RAB43Q86YS6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB43Q86YS6 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
RAB43Q86YS6 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RAB43Q86YS6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB43Q86YS6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB43Q86YS6 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RAB43Q86YS6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB43Q86YS6 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB43Q86YS6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB43Q86YS6 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB43Q86YS6 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB43Q86YS6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 ACTBP8-201ENST00000403258 1108 ntBASIC14.39□□□□□ -0.11
RAB43Q86YS6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 FAM197Y7-201ENST00000432892 766 ntBASIC14.39□□□□□ -0.11
RAB43Q86YS6 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 AC004066.1-201ENST00000502488 802 ntBASIC14.39□□□□□ -0.11
RAB43Q86YS6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.39□□□□□ -0.11
RAB43Q86YS6 AC009542.2-202ENST00000619004 1067 ntBASIC14.39□□□□□ -0.11
RAB43Q86YS6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 AL133338.1-201ENST00000565695 1517 ntBASIC14.39□□□□□ -0.11
RAB43Q86YS6 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 AHCYP2-201ENST00000430630 1300 ntBASIC14.39□□□□□ -0.11
RAB43Q86YS6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB43Q86YS6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB43Q86YS6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 LINC00552-201ENST00000625151 2579 ntBASIC14.38□□□□□ -0.11
RAB43Q86YS6 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 KRT8P44-201ENST00000441609 1350 ntBASIC14.38□□□□□ -0.11
RAB43Q86YS6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB43Q86YS6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB43Q86YS6 AC006001.1-201ENST00000325130 474 ntBASIC14.38□□□□□ -0.11
RAB43Q86YS6 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms