Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 AL136172.1-201ENST00000598590 1394 ntBASIC18.36■□□□□ 0.53
COL23A1Q86Y22 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 AC095040.1-201ENST00000513286 675 ntBASIC18.35■□□□□ 0.53
COL23A1Q86Y22 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.35■□□□□ 0.53
COL23A1Q86Y22 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 AC009093.10-201ENST00000641956 1442 ntBASIC18.34■□□□□ 0.53
COL23A1Q86Y22 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 IGHVIII-5-2-201ENST00000522505 261 ntBASIC18.34■□□□□ 0.53
COL23A1Q86Y22 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 ST5-261ENST00000626808 1071 ntTSL 5 BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL23A1Q86Y22 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
COL23A1Q86Y22 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.33■□□□□ 0.53
COL23A1Q86Y22 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL23A1Q86Y22 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL23A1Q86Y22 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
COL23A1Q86Y22 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.33■□□□□ 0.53
COL23A1Q86Y22 PRAL-201ENST00000624952 3286 ntBASIC18.33■□□□□ 0.53
COL23A1Q86Y22 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL23A1Q86Y22 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL23A1Q86Y22 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL23A1Q86Y22 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC18.33■□□□□ 0.53
COL23A1Q86Y22 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL23A1Q86Y22 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL23A1Q86Y22 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.33■□□□□ 0.53
COL23A1Q86Y22 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL23A1Q86Y22 PTGER4P2-201ENST00000328411 252 ntBASIC18.33■□□□□ 0.52
COL23A1Q86Y22 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
COL23A1Q86Y22 MIR1301-201ENST00000408518 82 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms