Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1AQ71U36 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1AQ71U36 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1AQ71U36 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1AQ71U36 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
TUBA1AQ71U36 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.93□□□□□ -0.18
TUBA1AQ71U36 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.93□□□□□ -0.18
TUBA1AQ71U36 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1AQ71U36 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1AQ71U36 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TUBA1AQ71U36 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1AQ71U36 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TUBA1AQ71U36 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TUBA1AQ71U36 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 AC009407.1-201ENST00000568958 598 ntBASIC13.92□□□□□ -0.18
TUBA1AQ71U36 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 AL450472.2-201ENST00000603663 1156 ntBASIC13.92□□□□□ -0.18
TUBA1AQ71U36 AL096865.1-201ENST00000606796 927 ntBASIC13.92□□□□□ -0.18
TUBA1AQ71U36 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.92□□□□□ -0.18
TUBA1AQ71U36 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.92□□□□□ -0.18
TUBA1AQ71U36 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 TSPY16P-201ENST00000449843 468 ntBASIC13.91□□□□□ -0.18
TUBA1AQ71U36 AC009477.1-201ENST00000452936 217 ntBASIC13.91□□□□□ -0.18
TUBA1AQ71U36 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.91□□□□□ -0.18
TUBA1AQ71U36 PHKG1P2-201ENST00000457537 863 ntBASIC13.91□□□□□ -0.18
TUBA1AQ71U36 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 AJ011932.1-201ENST00000621707 465 ntBASIC13.91□□□□□ -0.18
TUBA1AQ71U36 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms