Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMARCD3Q6STE5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMARCD3Q6STE5 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.74□□□□□ -0.21
SMARCD3Q6STE5 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMARCD3Q6STE5 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMARCD3Q6STE5 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.74□□□□□ -0.21
SMARCD3Q6STE5 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 AC015802.1-201ENST00000588104 1449 ntBASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 TREML5P-201ENST00000421694 576 ntBASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 FAM86GP-201ENST00000448322 971 ntBASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMARCD3Q6STE5 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 AC093525.8-201ENST00000624099 1342 ntBASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 DMBT1P1-203ENST00000636837 4628 ntBASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 TPT1P11-201ENST00000458482 498 ntBASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.72□□□□□ -0.21
SMARCD3Q6STE5 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms