Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
H3F3CQ6NXT2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
H3F3CQ6NXT2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
H3F3CQ6NXT2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H3F3CQ6NXT2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H3F3CQ6NXT2 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
H3F3CQ6NXT2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
H3F3CQ6NXT2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.87□□□□□ -0.19
H3F3CQ6NXT2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.87□□□□□ -0.19
H3F3CQ6NXT2 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H3F3CQ6NXT2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
H3F3CQ6NXT2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 AC023024.2-201ENST00000623561 1993 ntBASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 HIST2H2BB-201ENST00000449108 381 ntBASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 AC099548.2-209ENST00000480264 625 ntBASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 AP001002.3-201ENST00000623482 206 ntBASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 AL138725.1-201ENST00000407347 1314 ntBASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
H3F3CQ6NXT2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 AL359258.3-201ENST00000622910 2331 ntBASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 AL354877.1-201ENST00000424412 413 ntBASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 AC018735.1-201ENST00000437208 1502 ntBASIC13.85□□□□□ -0.19
H3F3CQ6NXT2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms