Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD4Q5XG99 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD4Q5XG99 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD4Q5XG99 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD4Q5XG99 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.52□□□□□ -0.08
LYSMD4Q5XG99 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD4Q5XG99 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD4Q5XG99 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD4Q5XG99 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 NDUFS6P1-201ENST00000485187 316 ntBASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 AL157792.1-201ENST00000488281 530 ntBASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 RN7SL81P-201ENST00000493781 261 ntBASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 AP000845.1-201ENST00000581677 2131 ntBASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 AL161773.1-201ENST00000624845 863 ntBASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSMD4Q5XG99 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 KRT18P36-201ENST00000411618 1276 ntBASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 NUDT4P2-201ENST00000578341 546 ntBASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 TMBIM7P-202ENST00000641474 1516 ntBASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD4Q5XG99 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 KRT8P31-201ENST00000504812 1408 ntBASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms