Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALD1Q05682 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALD1Q05682 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALD1Q05682 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC19.43■□□□□ 0.7
CALD1Q05682 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC19.43■□□□□ 0.7
CALD1Q05682 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.43■□□□□ 0.7
CALD1Q05682 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALD1Q05682 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALD1Q05682 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CALD1Q05682 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CALD1Q05682 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALD1Q05682 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC19.42■□□□□ 0.7
CALD1Q05682 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC19.42■□□□□ 0.7
CALD1Q05682 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC19.42■□□□□ 0.7
CALD1Q05682 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CALD1Q05682 AC007292.2-201ENST00000593524 1812 ntBASIC19.42■□□□□ 0.7
CALD1Q05682 AC092135.3-201ENST00000624151 1846 ntBASIC19.42■□□□□ 0.7
CALD1Q05682 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CALD1Q05682 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALD1Q05682 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALD1Q05682 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALD1Q05682 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CALD1Q05682 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.42■□□□□ 0.7
CALD1Q05682 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CALD1Q05682 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC19.42■□□□□ 0.7
CALD1Q05682 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC19.42■□□□□ 0.7
CALD1Q05682 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.42■□□□□ 0.7
CALD1Q05682 AC244157.2-201ENST00000616239 1006 ntBASIC19.42■□□□□ 0.7
CALD1Q05682 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC19.42■□□□□ 0.7
CALD1Q05682 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CALD1Q05682 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CALD1Q05682 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALD1Q05682 MRPL37P1-201ENST00000592451 1337 ntBASIC19.42■□□□□ 0.7
CALD1Q05682 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC19.42■□□□□ 0.7
CALD1Q05682 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC19.42■□□□□ 0.7
CALD1Q05682 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALD1Q05682 AC009093.2-202ENST00000620513 2079 ntBASIC19.42■□□□□ 0.7
CALD1Q05682 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALD1Q05682 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALD1Q05682 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC19.42■□□□□ 0.7
CALD1Q05682 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALD1Q05682 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALD1Q05682 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CALD1Q05682 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CALD1Q05682 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CALD1Q05682 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CALD1Q05682 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CALD1Q05682 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.41■□□□□ 0.7
CALD1Q05682 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC19.41■□□□□ 0.7
CALD1Q05682 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.41■□□□□ 0.7
CALD1Q05682 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.41■□□□□ 0.7
CALD1Q05682 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.41■□□□□ 0.7
CALD1Q05682 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CALD1Q05682 MIR4683-201ENST00000579659 81 ntBASIC19.41■□□□□ 0.7
CALD1Q05682 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.41■□□□□ 0.7
CALD1Q05682 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CALD1Q05682 AL023775.1-201ENST00000454907 1746 ntBASIC19.41■□□□□ 0.7
CALD1Q05682 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CALD1Q05682 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 TNRC18P2-201ENST00000417666 2714 ntBASIC19.41■□□□□ 0.7
CALD1Q05682 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC19.41■□□□□ 0.7
CALD1Q05682 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.41■□□□□ 0.7
CALD1Q05682 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CALD1Q05682 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC19.41■□□□□ 0.7
CALD1Q05682 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.41■□□□□ 0.7
CALD1Q05682 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CALD1Q05682 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALD1Q05682 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CALD1Q05682 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALD1Q05682 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CALD1Q05682 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CALD1Q05682 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CALD1Q05682 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CALD1Q05682 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.4■□□□□ 0.7
CALD1Q05682 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CALD1Q05682 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
CALD1Q05682 PUDPP3-201ENST00000445368 636 ntBASIC19.4■□□□□ 0.7
CALD1Q05682 Z93015.1-201ENST00000451718 390 ntBASIC19.4■□□□□ 0.7
CALD1Q05682 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.4■□□□□ 0.7
CALD1Q05682 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC19.4■□□□□ 0.7
CALD1Q05682 MIR4741-201ENST00000579822 90 ntBASIC19.4■□□□□ 0.7
CALD1Q05682 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms