Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.57□□□□□ -0.56
HIST1H1AQ02539 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 AC067863.1-201ENST00000494933 530 ntBASIC11.57□□□□□ -0.56
HIST1H1AQ02539 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 SDHAP3-202ENST00000515467 728 ntBASIC11.57□□□□□ -0.56
HIST1H1AQ02539 IGHV3-42-201ENST00000520410 361 ntBASIC11.57□□□□□ -0.56
HIST1H1AQ02539 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 ACE3P-201ENST00000423435 1973 ntBASIC11.57□□□□□ -0.56
HIST1H1AQ02539 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 AC140479.7-201ENST00000636301 2332 ntBASIC11.57□□□□□ -0.56
HIST1H1AQ02539 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H1AQ02539 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 SLC9A3P3-201ENST00000457608 2229 ntBASIC11.56□□□□□ -0.56
HIST1H1AQ02539 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 AL121723.1-201ENST00000445194 1519 ntBASIC11.56□□□□□ -0.56
HIST1H1AQ02539 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 AL139400.1-201ENST00000366220 510 ntBASIC11.56□□□□□ -0.56
HIST1H1AQ02539 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 AC010336.2-201ENST00000564226 506 ntBASIC11.56□□□□□ -0.56
HIST1H1AQ02539 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 AC025181.2-201ENST00000606994 802 ntBASIC11.56□□□□□ -0.56
HIST1H1AQ02539 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms