Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SCN7AQ01118 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCN7AQ01118 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC18.06■□□□□ 0.48
SCN7AQ01118 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC18.06■□□□□ 0.48
SCN7AQ01118 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN7AQ01118 GCSHP3-201ENST00000431120 391 ntBASIC18.06■□□□□ 0.48
SCN7AQ01118 CSNK1G2P1-201ENST00000442675 955 ntBASIC18.06■□□□□ 0.48
SCN7AQ01118 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SCN7AQ01118 SORD2P-201ENST00000558556 1069 ntBASIC18.06■□□□□ 0.48
SCN7AQ01118 NDUFB10P1-201ENST00000567319 521 ntBASIC18.06■□□□□ 0.48
SCN7AQ01118 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCN7AQ01118 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.06■□□□□ 0.48
SCN7AQ01118 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SCN7AQ01118 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
SCN7AQ01118 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN7AQ01118 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.06■□□□□ 0.48
SCN7AQ01118 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN7AQ01118 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCN7AQ01118 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN7AQ01118 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN7AQ01118 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN7AQ01118 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCN7AQ01118 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN7AQ01118 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC18.06■□□□□ 0.48
SCN7AQ01118 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SCN7AQ01118 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SCN7AQ01118 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SCN7AQ01118 AC019109.1-201ENST00000401725 1874 ntBASIC18.06■□□□□ 0.48
SCN7AQ01118 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN7AQ01118 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN7AQ01118 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN7AQ01118 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.06■□□□□ 0.48
SCN7AQ01118 AC011270.2-201ENST00000624293 2550 ntBASIC18.06■□□□□ 0.48
SCN7AQ01118 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN7AQ01118 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SCN7AQ01118 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC18.06■□□□□ 0.48
SCN7AQ01118 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC18.06■□□□□ 0.48
SCN7AQ01118 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC18.06■□□□□ 0.48
SCN7AQ01118 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
SCN7AQ01118 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCN7AQ01118 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC18.06■□□□□ 0.48
SCN7AQ01118 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
SCN7AQ01118 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCN7AQ01118 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC18.05■□□□□ 0.48
SCN7AQ01118 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC18.05■□□□□ 0.48
SCN7AQ01118 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.05■□□□□ 0.48
SCN7AQ01118 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
SCN7AQ01118 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SCN7AQ01118 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.05■□□□□ 0.48
SCN7AQ01118 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCN7AQ01118 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SCN7AQ01118 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCN7AQ01118 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCN7AQ01118 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCN7AQ01118 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCN7AQ01118 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCN7AQ01118 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SCN7AQ01118 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCN7AQ01118 FTX-216ENST00000638985 1367 ntTSL 5 BASIC18.05■□□□□ 0.48
SCN7AQ01118 RNVU1-8-201ENST00000364272 125 ntBASIC18.05■□□□□ 0.48
SCN7AQ01118 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC18.05■□□□□ 0.48
SCN7AQ01118 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC18.05■□□□□ 0.48
SCN7AQ01118 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SCN7AQ01118 HCG27-204ENST00000424675 895 ntTSL 3 BASIC18.05■□□□□ 0.48
SCN7AQ01118 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC18.05■□□□□ 0.48
SCN7AQ01118 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC18.05■□□□□ 0.48
SCN7AQ01118 AL132994.1-201ENST00000554098 400 ntBASIC18.05■□□□□ 0.48
SCN7AQ01118 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC18.05■□□□□ 0.48
SCN7AQ01118 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC18.05■□□□□ 0.48
SCN7AQ01118 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC18.05■□□□□ 0.48
SCN7AQ01118 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
SCN7AQ01118 AC091951.1-201ENST00000512854 2465 ntBASIC18.05■□□□□ 0.48
SCN7AQ01118 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCN7AQ01118 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCN7AQ01118 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCN7AQ01118 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCN7AQ01118 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SCN7AQ01118 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCN7AQ01118 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.04■□□□□ 0.48
SCN7AQ01118 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCN7AQ01118 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC18.04■□□□□ 0.48
SCN7AQ01118 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCN7AQ01118 BAK1P1-201ENST00000317045 636 ntBASIC18.04■□□□□ 0.48
SCN7AQ01118 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
SCN7AQ01118 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCN7AQ01118 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC18.04■□□□□ 0.48
SCN7AQ01118 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC18.04■□□□□ 0.48
SCN7AQ01118 AREG-202ENST00000502307 956 ntTSL 5 BASIC18.04■□□□□ 0.48
SCN7AQ01118 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SCN7AQ01118 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCN7AQ01118 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC18.04■□□□□ 0.48
SCN7AQ01118 USB1-205ENST00000561743 1135 ntTSL 3 BASIC18.04■□□□□ 0.48
SCN7AQ01118 HKR1-225ENST00000592168 566 ntTSL 4 BASIC18.04■□□□□ 0.48
SCN7AQ01118 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.04■□□□□ 0.48
SCN7AQ01118 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC18.04■□□□□ 0.48
SCN7AQ01118 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC18.04■□□□□ 0.48
SCN7AQ01118 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.04■□□□□ 0.48
SCN7AQ01118 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCN7AQ01118 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCN7AQ01118 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms