Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
YBX1P67809 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.58□□□□□ -0.07
YBX1P67809 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.58□□□□□ -0.07
YBX1P67809 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
YBX1P67809 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
YBX1P67809 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.58□□□□□ -0.07
YBX1P67809 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
YBX1P67809 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
YBX1P67809 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
YBX1P67809 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
YBX1P67809 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
YBX1P67809 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
YBX1P67809 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.58□□□□□ -0.08
YBX1P67809 PDIA3P1-201ENST00000471856 1510 ntBASIC14.58□□□□□ -0.08
YBX1P67809 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 GK-202ENST00000378941 458 ntTSL 3 BASIC14.58□□□□□ -0.08
YBX1P67809 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
YBX1P67809 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
YBX1P67809 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.58□□□□□ -0.08
YBX1P67809 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.58□□□□□ -0.08
YBX1P67809 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.58□□□□□ -0.08
YBX1P67809 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.58□□□□□ -0.08
YBX1P67809 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.58□□□□□ -0.08
YBX1P67809 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.58□□□□□ -0.08
YBX1P67809 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.58□□□□□ -0.08
YBX1P67809 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.58□□□□□ -0.08
YBX1P67809 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.58□□□□□ -0.08
YBX1P67809 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.58□□□□□ -0.08
YBX1P67809 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.58□□□□□ -0.08
YBX1P67809 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 AC025279.2-201ENST00000569730 653 ntBASIC14.58□□□□□ -0.08
YBX1P67809 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.58□□□□□ -0.08
YBX1P67809 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.58□□□□□ -0.08
YBX1P67809 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.58□□□□□ -0.08
YBX1P67809 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.58□□□□□ -0.08
YBX1P67809 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
YBX1P67809 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
YBX1P67809 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
YBX1P67809 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
YBX1P67809 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.58□□□□□ -0.08
YBX1P67809 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.58□□□□□ -0.08
YBX1P67809 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.57□□□□□ -0.08
YBX1P67809 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.57□□□□□ -0.08
YBX1P67809 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
YBX1P67809 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
YBX1P67809 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
YBX1P67809 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
YBX1P67809 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.57□□□□□ -0.08
YBX1P67809 MIR1909-201ENST00000411312 80 ntBASIC14.57□□□□□ -0.08
YBX1P67809 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.57□□□□□ -0.08
YBX1P67809 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.57□□□□□ -0.08
YBX1P67809 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.57□□□□□ -0.08
YBX1P67809 FAM197Y7-201ENST00000432892 766 ntBASIC14.57□□□□□ -0.08
YBX1P67809 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.57□□□□□ -0.08
YBX1P67809 AC007551.1-201ENST00000457394 519 ntBASIC14.57□□□□□ -0.08
YBX1P67809 ACA64.2-201ENST00000459014 129 ntBASIC14.57□□□□□ -0.08
YBX1P67809 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
YBX1P67809 AC119751.2-201ENST00000504529 210 ntBASIC14.57□□□□□ -0.08
YBX1P67809 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.57□□□□□ -0.08
YBX1P67809 MIR4259-201ENST00000584466 101 ntBASIC14.57□□□□□ -0.08
YBX1P67809 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.57□□□□□ -0.08
YBX1P67809 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.57□□□□□ -0.08
YBX1P67809 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.57□□□□□ -0.08
YBX1P67809 MIR6775-201ENST00000617557 69 ntBASIC14.57□□□□□ -0.08
YBX1P67809 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.57□□□□□ -0.08
YBX1P67809 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.57□□□□□ -0.08
YBX1P67809 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
YBX1P67809 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms