Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SKP1P63208 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
SKP1P63208 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SKP1P63208 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.25□□□□□ -0.13
SKP1P63208 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.25□□□□□ -0.13
SKP1P63208 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SKP1P63208 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.24□□□□□ -0.13
SKP1P63208 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SKP1P63208 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SKP1P63208 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.24□□□□□ -0.13
SKP1P63208 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SKP1P63208 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.24□□□□□ -0.13
SKP1P63208 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SKP1P63208 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SKP1P63208 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.24□□□□□ -0.13
SKP1P63208 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.24□□□□□ -0.13
SKP1P63208 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.24□□□□□ -0.13
SKP1P63208 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.24□□□□□ -0.13
SKP1P63208 MIR1909-201ENST00000411312 80 ntBASIC14.24□□□□□ -0.13
SKP1P63208 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 FAM21FP-201ENST00000426241 1131 ntBASIC14.24□□□□□ -0.13
SKP1P63208 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.24□□□□□ -0.13
SKP1P63208 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.24□□□□□ -0.13
SKP1P63208 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.24□□□□□ -0.13
SKP1P63208 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.24□□□□□ -0.13
SKP1P63208 AC244669.2-201ENST00000612320 853 ntBASIC14.24□□□□□ -0.13
SKP1P63208 AC008687.7-202ENST00000637404 953 ntBASIC14.24□□□□□ -0.13
SKP1P63208 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.24□□□□□ -0.13
SKP1P63208 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SKP1P63208 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.24□□□□□ -0.13
SKP1P63208 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SKP1P63208 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.24□□□□□ -0.13
SKP1P63208 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SKP1P63208 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.23□□□□□ -0.13
SKP1P63208 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.23□□□□□ -0.13
SKP1P63208 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.23□□□□□ -0.13
SKP1P63208 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.23□□□□□ -0.13
SKP1P63208 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SKP1P63208 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SKP1P63208 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.23□□□□□ -0.13
SKP1P63208 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.23□□□□□ -0.13
SKP1P63208 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.23□□□□□ -0.13
SKP1P63208 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.23□□□□□ -0.13
SKP1P63208 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.23□□□□□ -0.13
SKP1P63208 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.23□□□□□ -0.13
SKP1P63208 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.23□□□□□ -0.13
SKP1P63208 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.23□□□□□ -0.13
SKP1P63208 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.23□□□□□ -0.13
SKP1P63208 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.23□□□□□ -0.13
SKP1P63208 AC078819.1-201ENST00000547454 765 ntBASIC14.23□□□□□ -0.13
SKP1P63208 AC012085.1-201ENST00000548270 765 ntBASIC14.23□□□□□ -0.13
SKP1P63208 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.23□□□□□ -0.13
SKP1P63208 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SKP1P63208 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.23□□□□□ -0.13
SKP1P63208 COX11-210ENST00000639671 696 ntBASIC14.23□□□□□ -0.13
SKP1P63208 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
SKP1P63208 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
SKP1P63208 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.23□□□□□ -0.13
SKP1P63208 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SKP1P63208 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms