Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 HMGA1P5-201ENST00000412453 271 ntBASIC11.23□□□□□ -0.61
HIST1H2BDP58876 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 AC002347.1-201ENST00000569543 541 ntBASIC11.23□□□□□ -0.61
HIST1H2BDP58876 AC022517.1-201ENST00000592429 346 ntBASIC11.23□□□□□ -0.61
HIST1H2BDP58876 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 CYP2D8P-201ENST00000433633 1490 ntBASIC11.23□□□□□ -0.61
HIST1H2BDP58876 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 AC012569.1-201ENST00000591191 1524 ntBASIC11.23□□□□□ -0.61
HIST1H2BDP58876 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 PI4KAP1-204ENST00000612579 1703 ntBASIC11.23□□□□□ -0.61
HIST1H2BDP58876 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 AL132642.2-201ENST00000623423 1998 ntBASIC11.23□□□□□ -0.61
HIST1H2BDP58876 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 AC073862.5-201ENST00000624129 2027 ntBASIC11.23□□□□□ -0.61
HIST1H2BDP58876 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H2BDP58876 AL358933.1-201ENST00000565046 2830 ntBASIC11.22□□□□□ -0.61
HIST1H2BDP58876 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 MARK2P9-201ENST00000430958 1727 ntBASIC11.22□□□□□ -0.61
HIST1H2BDP58876 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 INTS4P1-201ENST00000438455 1935 ntBASIC11.22□□□□□ -0.61
HIST1H2BDP58876 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 RNA5SP413-201ENST00000516373 109 ntBASIC11.22□□□□□ -0.61
HIST1H2BDP58876 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 AC011840.2-201ENST00000563063 1520 ntBASIC11.22□□□□□ -0.61
HIST1H2BDP58876 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 HERC2P10-201ENST00000570209 2393 ntBASIC11.22□□□□□ -0.61
HIST1H2BDP58876 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 AC097359.3-201ENST00000603982 1210 ntBASIC11.22□□□□□ -0.61
HIST1H2BDP58876 AC064862.7-201ENST00000604520 867 ntBASIC11.22□□□□□ -0.61
HIST1H2BDP58876 AL139424.1-201ENST00000607572 797 ntBASIC11.22□□□□□ -0.61
HIST1H2BDP58876 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 AC092028.1-202ENST00000641483 3547 ntBASIC11.22□□□□□ -0.61
HIST1H2BDP58876 AC092028.1-201ENST00000641781 3540 ntBASIC11.22□□□□□ -0.61
HIST1H2BDP58876 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
HIST1H2BDP58876 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms