Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.12■□□□□ 0.01
WNT3AP56704 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.12■□□□□ 0.01
WNT3AP56704 ECM1P1-201ENST00000604092 1279 ntBASIC15.12■□□□□ 0.01
WNT3AP56704 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.12■□□□□ 0.01
WNT3AP56704 AC138696.2-201ENST00000607376 223 ntBASIC15.12■□□□□ 0.01
WNT3AP56704 AC012645.4-201ENST00000610691 1061 ntBASIC15.12■□□□□ 0.01
WNT3AP56704 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.12■□□□□ 0.01
WNT3AP56704 AL354718.3-201ENST00000616414 581 ntBASIC15.12■□□□□ 0.01
WNT3AP56704 CR382287.1-201ENST00000623954 586 ntBASIC15.12■□□□□ 0.01
WNT3AP56704 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
WNT3AP56704 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.12■□□□□ 0.01
WNT3AP56704 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 FKBP4P6-201ENST00000457486 1332 ntBASIC15.12■□□□□ 0.01
WNT3AP56704 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.12■□□□□ 0.01
WNT3AP56704 INE2-201ENST00000630399 1874 ntBASIC15.12■□□□□ 0.01
WNT3AP56704 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
WNT3AP56704 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.11■□□□□ 0.01
WNT3AP56704 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.11■□□□□ 0.01
WNT3AP56704 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
WNT3AP56704 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.11■□□□□ 0.01
WNT3AP56704 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.11■□□□□ 0.01
WNT3AP56704 AL590640.2-201ENST00000457038 527 ntBASIC15.11■□□□□ 0.01
WNT3AP56704 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 FTLP10-202ENST00000505798 471 ntBASIC15.11■□□□□ 0.01
WNT3AP56704 AC131206.1-201ENST00000538078 1211 ntBASIC15.11■□□□□ 0.01
WNT3AP56704 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 CR383656.12-201ENST00000549567 513 ntBASIC15.11■□□□□ 0.01
WNT3AP56704 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.11■□□□□ 0.01
WNT3AP56704 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.11■□□□□ 0.01
WNT3AP56704 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.11■□□□□ 0.01
WNT3AP56704 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.11■□□□□ 0.01
WNT3AP56704 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.11■□□□□ 0.01
WNT3AP56704 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.11■□□□□ 0.01
WNT3AP56704 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 AC020910.5-201ENST00000623668 1865 ntBASIC15.11■□□□□ 0.01
WNT3AP56704 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
WNT3AP56704 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.11■□□□□ 0.01
WNT3AP56704 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.11■□□□□ 0.01
WNT3AP56704 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.11■□□□□ 0.01
WNT3AP56704 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3AP56704 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.11■□□□□ 0.01
WNT3AP56704 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
WNT3AP56704 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
WNT3AP56704 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
WNT3AP56704 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
WNT3AP56704 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.1■□□□□ 0.01
WNT3AP56704 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
WNT3AP56704 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
WNT3AP56704 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.1■□□□□ 0.01
WNT3AP56704 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
WNT3AP56704 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
WNT3AP56704 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
WNT3AP56704 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.1■□□□□ 0.01
WNT3AP56704 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
WNT3AP56704 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
WNT3AP56704 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
WNT3AP56704 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
WNT3AP56704 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
WNT3AP56704 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.1■□□□□ 0.01
WNT3AP56704 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
WNT3AP56704 FAM197Y7-201ENST00000432892 766 ntBASIC15.1■□□□□ 0.01
WNT3AP56704 AC016694.1-201ENST00000434179 700 ntBASIC15.1■□□□□ 0.01
WNT3AP56704 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.1■□□□□ 0.01
WNT3AP56704 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.1■□□□□ 0.01
WNT3AP56704 AL391280.1-201ENST00000506969 1062 ntBASIC15.1■□□□□ 0.01
WNT3AP56704 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
WNT3AP56704 RNA5SP486-201ENST00000515961 83 ntBASIC15.1■□□□□ 0.01
WNT3AP56704 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.1■□□□□ 0.01
WNT3AP56704 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms