Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRPF1P55201 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19■□□□□ 0.63
BRPF1P55201 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
BRPF1P55201 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
BRPF1P55201 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC19■□□□□ 0.63
BRPF1P55201 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRPF1P55201 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
BRPF1P55201 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
BRPF1P55201 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRPF1P55201 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRPF1P55201 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.99■□□□□ 0.63
BRPF1P55201 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRPF1P55201 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC18.99■□□□□ 0.63
BRPF1P55201 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC18.99■□□□□ 0.63
BRPF1P55201 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRPF1P55201 AC139712.1-201ENST00000378256 1875 ntBASIC18.99■□□□□ 0.63
BRPF1P55201 PKD1P5-201ENST00000532415 10291 ntBASIC18.99■□□□□ 0.63
BRPF1P55201 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRPF1P55201 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC18.99■□□□□ 0.63
BRPF1P55201 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRPF1P55201 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRPF1P55201 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRPF1P55201 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRPF1P55201 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.99■□□□□ 0.63
BRPF1P55201 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.99■□□□□ 0.63
BRPF1P55201 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.99■□□□□ 0.63
BRPF1P55201 AC079316.1-201ENST00000548397 411 ntBASIC18.99■□□□□ 0.63
BRPF1P55201 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.99■□□□□ 0.63
BRPF1P55201 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
BRPF1P55201 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC18.99■□□□□ 0.63
BRPF1P55201 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
BRPF1P55201 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.99■□□□□ 0.63
BRPF1P55201 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
BRPF1P55201 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
BRPF1P55201 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
BRPF1P55201 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
BRPF1P55201 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
BRPF1P55201 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRPF1P55201 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRPF1P55201 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.99■□□□□ 0.63
BRPF1P55201 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRPF1P55201 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRPF1P55201 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRPF1P55201 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.99■□□□□ 0.63
BRPF1P55201 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRPF1P55201 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.98■□□□□ 0.63
BRPF1P55201 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
BRPF1P55201 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
BRPF1P55201 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.98■□□□□ 0.63
BRPF1P55201 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 FXNP2-201ENST00000411625 547 ntBASIC18.98■□□□□ 0.63
BRPF1P55201 PUDPP3-201ENST00000445368 636 ntBASIC18.98■□□□□ 0.63
BRPF1P55201 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.98■□□□□ 0.63
BRPF1P55201 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.98■□□□□ 0.63
BRPF1P55201 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.98■□□□□ 0.63
BRPF1P55201 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.98■□□□□ 0.63
BRPF1P55201 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.98■□□□□ 0.63
BRPF1P55201 ZACNP1-201ENST00000612259 710 ntBASIC18.98■□□□□ 0.63
BRPF1P55201 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 AC068418.2-201ENST00000577309 3703 ntBASIC18.98■□□□□ 0.63
BRPF1P55201 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
BRPF1P55201 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
BRPF1P55201 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 KHSRPP1-201ENST00000427983 1768 ntBASIC18.98■□□□□ 0.63
BRPF1P55201 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 AHCYP2-201ENST00000430630 1300 ntBASIC18.98■□□□□ 0.63
BRPF1P55201 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRPF1P55201 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRPF1P55201 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRPF1P55201 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
BRPF1P55201 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRPF1P55201 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRPF1P55201 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRPF1P55201 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
BRPF1P55201 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BRPF1P55201 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRPF1P55201 MYADML-201ENST00000474610 2147 ntBASIC18.97■□□□□ 0.63
BRPF1P55201 AL136172.1-201ENST00000598590 1394 ntBASIC18.97■□□□□ 0.63
BRPF1P55201 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
BRPF1P55201 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
BRPF1P55201 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRPF1P55201 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BRPF1P55201 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms