Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.07□□□□□ -0.32
ATP1B3P54709 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.07□□□□□ -0.32
ATP1B3P54709 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 AC018442.1-201ENST00000421439 2061 ntBASIC13.07□□□□□ -0.32
ATP1B3P54709 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ATP1B3P54709 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.07□□□□□ -0.32
ATP1B3P54709 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.07□□□□□ -0.32
ATP1B3P54709 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.07□□□□□ -0.32
ATP1B3P54709 KRT18P28-201ENST00000453838 1332 ntBASIC13.07□□□□□ -0.32
ATP1B3P54709 AL360270.3-201ENST00000609118 1348 ntBASIC13.07□□□□□ -0.32
ATP1B3P54709 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ATP1B3P54709 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.07□□□□□ -0.32
ATP1B3P54709 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ATP1B3P54709 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.07□□□□□ -0.32
ATP1B3P54709 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATP1B3P54709 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 CICP8-201ENST00000455800 2813 ntBASIC13.06□□□□□ -0.32
ATP1B3P54709 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
ATP1B3P54709 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.06□□□□□ -0.32
ATP1B3P54709 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.06□□□□□ -0.32
ATP1B3P54709 TSSK5P-201ENST00000423978 907 ntBASIC13.06□□□□□ -0.32
ATP1B3P54709 METTL21AP1-201ENST00000438852 635 ntBASIC13.06□□□□□ -0.32
ATP1B3P54709 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.06□□□□□ -0.32
ATP1B3P54709 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.06□□□□□ -0.32
ATP1B3P54709 AL512638.1-201ENST00000457493 794 ntBASIC13.06□□□□□ -0.32
ATP1B3P54709 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.06□□□□□ -0.32
ATP1B3P54709 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.06□□□□□ -0.32
ATP1B3P54709 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.06□□□□□ -0.32
ATP1B3P54709 AC036164.1-201ENST00000570544 333 ntBASIC13.06□□□□□ -0.32
ATP1B3P54709 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.06□□□□□ -0.32
ATP1B3P54709 SRD5A3P1-201ENST00000603021 949 ntBASIC13.06□□□□□ -0.32
ATP1B3P54709 AC023511.2-201ENST00000618803 211 ntBASIC13.06□□□□□ -0.32
ATP1B3P54709 AL390754.1-201ENST00000619088 582 ntBASIC13.06□□□□□ -0.32
ATP1B3P54709 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
ATP1B3P54709 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.06□□□□□ -0.32
ATP1B3P54709 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.06□□□□□ -0.32
ATP1B3P54709 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
ATP1B3P54709 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
ATP1B3P54709 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
ATP1B3P54709 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.06□□□□□ -0.32
ATP1B3P54709 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.06□□□□□ -0.32
ATP1B3P54709 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.06□□□□□ -0.32
ATP1B3P54709 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATP1B3P54709 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.05□□□□□ -0.32
ATP1B3P54709 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.05□□□□□ -0.32
ATP1B3P54709 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.05□□□□□ -0.32
ATP1B3P54709 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
ATP1B3P54709 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.05□□□□□ -0.32
ATP1B3P54709 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
ATP1B3P54709 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATP1B3P54709 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.05□□□□□ -0.32
ATP1B3P54709 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.05□□□□□ -0.32
ATP1B3P54709 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.05□□□□□ -0.32
ATP1B3P54709 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms