Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATXN3P54252 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.41■□□□□ 0.06
ATXN3P54252 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATXN3P54252 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.41■□□□□ 0.06
ATXN3P54252 PHKG1P2-201ENST00000457537 863 ntBASIC15.41■□□□□ 0.06
ATXN3P54252 KRT18P43-201ENST00000469825 1281 ntBASIC15.41■□□□□ 0.06
ATXN3P54252 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATXN3P54252 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.41■□□□□ 0.06
ATXN3P54252 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.41■□□□□ 0.06
ATXN3P54252 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.41■□□□□ 0.06
ATXN3P54252 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.41■□□□□ 0.06
ATXN3P54252 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.41■□□□□ 0.06
ATXN3P54252 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.41■□□□□ 0.06
ATXN3P54252 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.41■□□□□ 0.06
ATXN3P54252 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATXN3P54252 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATXN3P54252 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATXN3P54252 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ATXN3P54252 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.41■□□□□ 0.06
ATXN3P54252 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.41■□□□□ 0.06
ATXN3P54252 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
ATXN3P54252 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATXN3P54252 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
ATXN3P54252 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ATXN3P54252 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ATXN3P54252 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.41■□□□□ 0.06
ATXN3P54252 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATXN3P54252 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.41■□□□□ 0.06
ATXN3P54252 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATXN3P54252 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATXN3P54252 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATXN3P54252 C18orf15-201ENST00000623680 2534 ntBASIC15.41■□□□□ 0.06
ATXN3P54252 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATXN3P54252 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
ATXN3P54252 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATXN3P54252 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATXN3P54252 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.41■□□□□ 0.06
ATXN3P54252 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATXN3P54252 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.41■□□□□ 0.06
ATXN3P54252 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATXN3P54252 AL607033.1-201ENST00000623900 1599 ntBASIC15.41■□□□□ 0.06
ATXN3P54252 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ATXN3P54252 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.4■□□□□ 0.06
ATXN3P54252 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
ATXN3P54252 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ATXN3P54252 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.4■□□□□ 0.06
ATXN3P54252 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
ATXN3P54252 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 CNN2P8-201ENST00000421872 913 ntBASIC15.4■□□□□ 0.06
ATXN3P54252 ZNF767P-206ENST00000513792 565 ntBASIC15.4■□□□□ 0.06
ATXN3P54252 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.4■□□□□ 0.06
ATXN3P54252 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.4■□□□□ 0.06
ATXN3P54252 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.4■□□□□ 0.06
ATXN3P54252 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.4■□□□□ 0.06
ATXN3P54252 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.4■□□□□ 0.06
ATXN3P54252 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.4■□□□□ 0.06
ATXN3P54252 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.4■□□□□ 0.06
ATXN3P54252 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ATXN3P54252 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.4■□□□□ 0.06
ATXN3P54252 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.4■□□□□ 0.06
ATXN3P54252 AL450472.2-201ENST00000603663 1156 ntBASIC15.4■□□□□ 0.06
ATXN3P54252 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.4■□□□□ 0.06
ATXN3P54252 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.4■□□□□ 0.06
ATXN3P54252 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.4■□□□□ 0.06
ATXN3P54252 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
ATXN3P54252 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 AC005089.1-201ENST00000619486 2241 ntBASIC15.4■□□□□ 0.06
ATXN3P54252 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ATXN3P54252 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
ATXN3P54252 AHCYP2-201ENST00000430630 1300 ntBASIC15.4■□□□□ 0.06
ATXN3P54252 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.4■□□□□ 0.06
ATXN3P54252 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATXN3P54252 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
ATXN3P54252 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.39■□□□□ 0.06
ATXN3P54252 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATXN3P54252 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.39■□□□□ 0.05
ATXN3P54252 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.39■□□□□ 0.05
ATXN3P54252 AC105250.1-201ENST00000509378 2057 ntBASIC15.39■□□□□ 0.05
ATXN3P54252 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms