Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB28P51157 ALG3P1-201ENST00000508806 1114 ntBASIC14.43□□□□□ -0.1
RAB28P51157 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.43□□□□□ -0.1
RAB28P51157 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.43□□□□□ -0.1
RAB28P51157 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB28P51157 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB28P51157 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.43□□□□□ -0.1
RAB28P51157 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB28P51157 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RAB28P51157 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.43□□□□□ -0.1
RAB28P51157 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RAB28P51157 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB28P51157 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RAB28P51157 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RAB28P51157 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RAB28P51157 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB28P51157 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB28P51157 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB28P51157 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB28P51157 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
RAB28P51157 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB28P51157 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB28P51157 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB28P51157 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB28P51157 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB28P51157 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB28P51157 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB28P51157 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB28P51157 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB28P51157 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.42□□□□□ -0.1
RAB28P51157 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB28P51157 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB28P51157 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
RAB28P51157 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB28P51157 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RAB28P51157 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB28P51157 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RAB28P51157 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 CHMP1AP1-201ENST00000445563 662 ntBASIC14.42□□□□□ -0.1
RAB28P51157 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.42□□□□□ -0.1
RAB28P51157 AL583810.1-201ENST00000553344 1045 ntBASIC14.42□□□□□ -0.1
RAB28P51157 MIR4683-201ENST00000579659 81 ntBASIC14.42□□□□□ -0.1
RAB28P51157 EEF1DP1-201ENST00000585891 896 ntBASIC14.42□□□□□ -0.1
RAB28P51157 BX088702.1-201ENST00000610784 235 ntBASIC14.42□□□□□ -0.1
RAB28P51157 AC009542.2-202ENST00000619004 1067 ntBASIC14.42□□□□□ -0.1
RAB28P51157 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 AC007292.2-201ENST00000593524 1812 ntBASIC14.42□□□□□ -0.1
RAB28P51157 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB28P51157 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB28P51157 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RAB28P51157 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB28P51157 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB28P51157 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB28P51157 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.42□□□□□ -0.1
RAB28P51157 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB28P51157 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 TUBB1P2-201ENST00000422712 1306 ntBASIC14.41□□□□□ -0.1
RAB28P51157 TUBB1P1-201ENST00000503144 1300 ntBASIC14.41□□□□□ -0.1
RAB28P51157 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB28P51157 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
RAB28P51157 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 AC092135.3-201ENST00000624151 1846 ntBASIC14.41□□□□□ -0.1
RAB28P51157 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RAB28P51157 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB28P51157 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms