Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC6A9P48067 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC6A9P48067 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC6A9P48067 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC6A9P48067 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.33□□□□□ -0.28
SLC6A9P48067 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC6A9P48067 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.33□□□□□ -0.28
SLC6A9P48067 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.33□□□□□ -0.28
SLC6A9P48067 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC6A9P48067 LILRP1-201ENST00000444199 1370 ntBASIC13.32□□□□□ -0.28
SLC6A9P48067 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC6A9P48067 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC6A9P48067 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC6A9P48067 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC6A9P48067 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.32□□□□□ -0.28
SLC6A9P48067 GNAQP1-201ENST00000444815 1067 ntBASIC13.32□□□□□ -0.28
SLC6A9P48067 SPTLC1P1-201ENST00000447199 261 ntBASIC13.32□□□□□ -0.28
SLC6A9P48067 VDAC1P7-201ENST00000462417 847 ntBASIC13.32□□□□□ -0.28
SLC6A9P48067 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.32□□□□□ -0.28
SLC6A9P48067 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC6A9P48067 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.32□□□□□ -0.28
SLC6A9P48067 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.32□□□□□ -0.28
SLC6A9P48067 AL391069.4-201ENST00000609583 481 ntBASIC13.32□□□□□ -0.28
SLC6A9P48067 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 AL157414.3-201ENST00000624276 1954 ntBASIC13.32□□□□□ -0.28
SLC6A9P48067 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
SLC6A9P48067 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC6A9P48067 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC6A9P48067 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC6A9P48067 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC6A9P48067 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC6A9P48067 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC6A9P48067 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SLC6A9P48067 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC6A9P48067 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC6A9P48067 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SLC6A9P48067 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC6A9P48067 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SLC6A9P48067 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC6A9P48067 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC6A9P48067 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC6A9P48067 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC6A9P48067 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC6A9P48067 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC6A9P48067 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC6A9P48067 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC6A9P48067 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC6A9P48067 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC6A9P48067 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC6A9P48067 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SLC6A9P48067 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC6A9P48067 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms