Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX2-1P43699 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
NKX2-1P43699 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-1P43699 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-1P43699 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX2-1P43699 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
NKX2-1P43699 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
NKX2-1P43699 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
NKX2-1P43699 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
NKX2-1P43699 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
NKX2-1P43699 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.33□□□□□ -0.44
NKX2-1P43699 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
NKX2-1P43699 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.33□□□□□ -0.44
NKX2-1P43699 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.33□□□□□ -0.44
NKX2-1P43699 UXT-AS1-201ENST00000590504 1525 ntBASIC12.33□□□□□ -0.44
NKX2-1P43699 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
NKX2-1P43699 AC105206.1-202ENST00000314927 2368 ntBASIC12.33□□□□□ -0.44
NKX2-1P43699 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
NKX2-1P43699 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.33□□□□□ -0.44
NKX2-1P43699 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
NKX2-1P43699 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
NKX2-1P43699 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
NKX2-1P43699 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.33□□□□□ -0.44
NKX2-1P43699 MED15P5-201ENST00000423150 992 ntBASIC12.33□□□□□ -0.44
NKX2-1P43699 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.33□□□□□ -0.44
NKX2-1P43699 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.33□□□□□ -0.44
NKX2-1P43699 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
NKX2-1P43699 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.33□□□□□ -0.44
NKX2-1P43699 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.33□□□□□ -0.44
NKX2-1P43699 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.33□□□□□ -0.44
NKX2-1P43699 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.33□□□□□ -0.44
NKX2-1P43699 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.33□□□□□ -0.44
NKX2-1P43699 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 FP325330.2-201ENST00000624219 5630 ntBASIC12.33□□□□□ -0.44
NKX2-1P43699 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX2-1P43699 AC092053.3-201ENST00000641308 4975 ntBASIC12.32□□□□□ -0.44
NKX2-1P43699 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 DGCR9-201ENST00000609630 2415 ntBASIC12.32□□□□□ -0.44
NKX2-1P43699 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.32□□□□□ -0.44
NKX2-1P43699 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-1P43699 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-1P43699 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
NKX2-1P43699 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
NKX2-1P43699 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
NKX2-1P43699 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.32□□□□□ -0.44
NKX2-1P43699 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
NKX2-1P43699 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
NKX2-1P43699 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 KRT18P3-201ENST00000451602 1288 ntBASIC12.32□□□□□ -0.44
NKX2-1P43699 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-1P43699 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 AC079140.1-201ENST00000508039 487 ntBASIC12.32□□□□□ -0.44
NKX2-1P43699 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-1P43699 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-1P43699 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
NKX2-1P43699 SLC25A39P2-201ENST00000537614 270 ntBASIC12.32□□□□□ -0.44
NKX2-1P43699 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
NKX2-1P43699 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 SAMD11P1-201ENST00000571429 661 ntBASIC12.32□□□□□ -0.44
NKX2-1P43699 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.32□□□□□ -0.44
NKX2-1P43699 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
NKX2-1P43699 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.32□□□□□ -0.44
NKX2-1P43699 AC026120.1-201ENST00000611536 926 ntBASIC12.32□□□□□ -0.44
NKX2-1P43699 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms