Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
EPHA3P29320 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EPHA3P29320 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
EPHA3P29320 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
EPHA3P29320 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
EPHA3P29320 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.62□□□□□ -0.07
EPHA3P29320 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EPHA3P29320 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
EPHA3P29320 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
EPHA3P29320 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
EPHA3P29320 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.62□□□□□ -0.07
EPHA3P29320 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.62□□□□□ -0.07
EPHA3P29320 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EPHA3P29320 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
EPHA3P29320 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.61□□□□□ -0.07
EPHA3P29320 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.61□□□□□ -0.07
EPHA3P29320 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.61□□□□□ -0.07
EPHA3P29320 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
EPHA3P29320 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.61□□□□□ -0.07
EPHA3P29320 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.61□□□□□ -0.07
EPHA3P29320 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.61□□□□□ -0.07
EPHA3P29320 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 KRT8P14-201ENST00000414254 1442 ntBASIC14.61□□□□□ -0.07
EPHA3P29320 KRT8P22-201ENST00000562317 1415 ntBASIC14.61□□□□□ -0.07
EPHA3P29320 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
EPHA3P29320 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.61□□□□□ -0.07
EPHA3P29320 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.61□□□□□ -0.07
EPHA3P29320 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
EPHA3P29320 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.61□□□□□ -0.07
EPHA3P29320 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.61□□□□□ -0.07
EPHA3P29320 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.61□□□□□ -0.07
EPHA3P29320 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.61□□□□□ -0.07
EPHA3P29320 AC069262.1-201ENST00000539058 672 ntBASIC14.61□□□□□ -0.07
EPHA3P29320 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.61□□□□□ -0.07
EPHA3P29320 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.61□□□□□ -0.07
EPHA3P29320 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.61□□□□□ -0.07
EPHA3P29320 AC044860.1-202ENST00000559481 777 ntBASIC14.61□□□□□ -0.07
EPHA3P29320 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
EPHA3P29320 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.61□□□□□ -0.07
EPHA3P29320 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
EPHA3P29320 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.61□□□□□ -0.07
EPHA3P29320 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
EPHA3P29320 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
EPHA3P29320 INE2-201ENST00000630399 1874 ntBASIC14.61□□□□□ -0.07
EPHA3P29320 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.61□□□□□ -0.07
EPHA3P29320 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EPHA3P29320 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
EPHA3P29320 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.6□□□□□ -0.07
EPHA3P29320 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
EPHA3P29320 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 AC105206.1-202ENST00000314927 2368 ntBASIC14.6□□□□□ -0.07
EPHA3P29320 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
EPHA3P29320 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
EPHA3P29320 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
EPHA3P29320 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
EPHA3P29320 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.6□□□□□ -0.07
EPHA3P29320 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.6□□□□□ -0.07
EPHA3P29320 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.6□□□□□ -0.07
EPHA3P29320 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.6□□□□□ -0.07
EPHA3P29320 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
EPHA3P29320 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
EPHA3P29320 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms