Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHATP28329 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.85□□□□□ -0.35
CHATP28329 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHATP28329 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHATP28329 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.85□□□□□ -0.35
CHATP28329 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHATP28329 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHATP28329 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.85□□□□□ -0.35
CHATP28329 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CHATP28329 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.85□□□□□ -0.35
CHATP28329 TUBB3P1-201ENST00000405796 1332 ntBASIC12.85□□□□□ -0.35
CHATP28329 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CHATP28329 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.85□□□□□ -0.35
CHATP28329 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHATP28329 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHATP28329 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHATP28329 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.85□□□□□ -0.35
CHATP28329 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHATP28329 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CHATP28329 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CHATP28329 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.84□□□□□ -0.35
CHATP28329 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CHATP28329 AC018665.1-201ENST00000622927 1362 ntBASIC12.84□□□□□ -0.35
CHATP28329 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
CHATP28329 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
CHATP28329 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CHATP28329 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.84□□□□□ -0.35
CHATP28329 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CHATP28329 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CHATP28329 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.84□□□□□ -0.35
CHATP28329 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
CHATP28329 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
CHATP28329 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.84□□□□□ -0.35
CHATP28329 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.84□□□□□ -0.35
CHATP28329 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.84□□□□□ -0.35
CHATP28329 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.84□□□□□ -0.35
CHATP28329 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.84□□□□□ -0.35
CHATP28329 AC125807.1-201ENST00000483097 614 ntBASIC12.84□□□□□ -0.35
CHATP28329 GAPDHP40-201ENST00000505218 1006 ntBASIC12.84□□□□□ -0.35
CHATP28329 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.84□□□□□ -0.35
CHATP28329 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.84□□□□□ -0.35
CHATP28329 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.84□□□□□ -0.35
CHATP28329 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.84□□□□□ -0.35
CHATP28329 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.84□□□□□ -0.35
CHATP28329 AC092337.1-201ENST00000568699 1129 ntBASIC12.84□□□□□ -0.35
CHATP28329 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.84□□□□□ -0.35
CHATP28329 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.84□□□□□ -0.35
CHATP28329 AC092364.2-202ENST00000597012 1073 ntBASIC12.84□□□□□ -0.35
CHATP28329 AL844908.2-201ENST00000609461 460 ntBASIC12.84□□□□□ -0.35
CHATP28329 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.84□□□□□ -0.35
CHATP28329 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CHATP28329 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CHATP28329 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.84□□□□□ -0.35
CHATP28329 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHATP28329 CICP20-201ENST00000443330 2801 ntBASIC12.84□□□□□ -0.35
CHATP28329 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.83□□□□□ -0.35
CHATP28329 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CHATP28329 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.83□□□□□ -0.35
CHATP28329 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.83□□□□□ -0.35
CHATP28329 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.83□□□□□ -0.35
CHATP28329 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHATP28329 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHATP28329 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHATP28329 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHATP28329 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHATP28329 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHATP28329 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHATP28329 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CHATP28329 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
CHATP28329 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHATP28329 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHATP28329 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHATP28329 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.83□□□□□ -0.36
CHATP28329 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.83□□□□□ -0.36
CHATP28329 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHATP28329 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.83□□□□□ -0.36
CHATP28329 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms