Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
ABCD3P28288 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCD3P28288 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCD3P28288 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.81□□□□□ -0.2
ABCD3P28288 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCD3P28288 SNX18-202ENST00000343017 3140 ntBASIC13.81□□□□□ -0.2
ABCD3P28288 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCD3P28288 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ABCD3P28288 AP000593.2-201ENST00000542775 1433 ntBASIC13.81□□□□□ -0.2
ABCD3P28288 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCD3P28288 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.8□□□□□ -0.2
ABCD3P28288 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ABCD3P28288 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.8□□□□□ -0.2
ABCD3P28288 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.8□□□□□ -0.2
ABCD3P28288 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.8□□□□□ -0.2
ABCD3P28288 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
ABCD3P28288 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ABCD3P28288 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.8□□□□□ -0.2
ABCD3P28288 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.8□□□□□ -0.2
ABCD3P28288 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ABCD3P28288 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 RN7SKP230-201ENST00000365642 335 ntBASIC13.8□□□□□ -0.2
ABCD3P28288 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.8□□□□□ -0.2
ABCD3P28288 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.8□□□□□ -0.2
ABCD3P28288 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ABCD3P28288 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.8□□□□□ -0.2
ABCD3P28288 COX5BP1-201ENST00000507622 393 ntBASIC13.8□□□□□ -0.2
ABCD3P28288 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.8□□□□□ -0.2
ABCD3P28288 AP003171.2-201ENST00000528208 925 ntBASIC13.8□□□□□ -0.2
ABCD3P28288 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.8□□□□□ -0.2
ABCD3P28288 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.8□□□□□ -0.2
ABCD3P28288 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.8□□□□□ -0.2
ABCD3P28288 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.8□□□□□ -0.2
ABCD3P28288 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.8□□□□□ -0.2
ABCD3P28288 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.8□□□□□ -0.2
ABCD3P28288 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.8□□□□□ -0.2
ABCD3P28288 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ABCD3P28288 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ABCD3P28288 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 AC020910.5-201ENST00000623668 1865 ntBASIC13.8□□□□□ -0.2
ABCD3P28288 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.8□□□□□ -0.2
ABCD3P28288 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
ABCD3P28288 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
ABCD3P28288 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
ABCD3P28288 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
ABCD3P28288 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCD3P28288 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCD3P28288 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCD3P28288 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
ABCD3P28288 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.79□□□□□ -0.2
ABCD3P28288 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ABCD3P28288 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.79□□□□□ -0.2
ABCD3P28288 CICP14-201ENST00000629111 2732 ntBASIC13.79□□□□□ -0.2
ABCD3P28288 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCD3P28288 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ABCD3P28288 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ABCD3P28288 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCD3P28288 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ABCD3P28288 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms