Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 FAM207CP-201ENST00000443486 507 ntBASIC12.86□□□□□ -0.35
CCL1P22362 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 MESTP3-201ENST00000503460 968 ntBASIC12.86□□□□□ -0.35
CCL1P22362 AC103988.2-201ENST00000561804 725 ntBASIC12.86□□□□□ -0.35
CCL1P22362 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL1P22362 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
CCL1P22362 AJ011932.1-201ENST00000621707 465 ntBASIC12.86□□□□□ -0.35
CCL1P22362 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CCL1P22362 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL1P22362 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL1P22362 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CCL1P22362 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CCL1P22362 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CCL1P22362 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 KRT8P24-201ENST00000560290 1559 ntBASIC12.86□□□□□ -0.35
CCL1P22362 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL1P22362 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CCL1P22362 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CCL1P22362 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.85□□□□□ -0.35
CCL1P22362 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
CCL1P22362 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CCL1P22362 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL1P22362 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL1P22362 AC245100.3-201ENST00000441281 285 ntBASIC12.85□□□□□ -0.35
CCL1P22362 AC092183.1-201ENST00000469884 875 ntBASIC12.85□□□□□ -0.35
CCL1P22362 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CCL1P22362 ALG3P1-201ENST00000508806 1114 ntBASIC12.85□□□□□ -0.35
CCL1P22362 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 API5-211ENST00000534695 560 ntTSL 5 BASIC12.85□□□□□ -0.35
CCL1P22362 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.85□□□□□ -0.35
CCL1P22362 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
CCL1P22362 AC009486.1-201ENST00000569860 813 ntBASIC12.85□□□□□ -0.35
CCL1P22362 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CCL1P22362 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CCL1P22362 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.85□□□□□ -0.35
CCL1P22362 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CCL1P22362 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL1P22362 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL1P22362 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL1P22362 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CCL1P22362 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL1P22362 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CCL1P22362 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CCL1P22362 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CCL1P22362 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL1P22362 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.84□□□□□ -0.35
CCL1P22362 AC015688.4-201ENST00000580780 1647 ntBASIC12.84□□□□□ -0.35
CCL1P22362 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.84□□□□□ -0.35
CCL1P22362 AC012617.1-204ENST00000586340 2305 ntBASIC12.84□□□□□ -0.35
CCL1P22362 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.84□□□□□ -0.35
CCL1P22362 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.84□□□□□ -0.35
CCL1P22362 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CCL1P22362 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.84□□□□□ -0.35
CCL1P22362 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CCL1P22362 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CCL1P22362 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
CCL1P22362 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms