Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
RAB3BP20337 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RAB3BP20337 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 AL121723.1-201ENST00000445194 1519 ntBASIC13.18□□□□□ -0.3
RAB3BP20337 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB3BP20337 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB3BP20337 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB3BP20337 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB3BP20337 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RAB3BP20337 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB3BP20337 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB3BP20337 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB3BP20337 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB3BP20337 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB3BP20337 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RAB3BP20337 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB3BP20337 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RAB3BP20337 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 AL592309.1-201ENST00000443127 649 ntBASIC13.18□□□□□ -0.3
RAB3BP20337 AC069335.1-201ENST00000489972 472 ntBASIC13.18□□□□□ -0.3
RAB3BP20337 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB3BP20337 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB3BP20337 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB3BP20337 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB3BP20337 AC018529.1-201ENST00000613063 361 ntBASIC13.18□□□□□ -0.3
RAB3BP20337 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
RAB3BP20337 MIR6069-201ENST00000620069 79 ntBASIC13.18□□□□□ -0.3
RAB3BP20337 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB3BP20337 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB3BP20337 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB3BP20337 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB3BP20337 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RAB3BP20337 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RAB3BP20337 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RAB3BP20337 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB3BP20337 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RAB3BP20337 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RAB3BP20337 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RAB3BP20337 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB3BP20337 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB3BP20337 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB3BP20337 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB3BP20337 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
RAB3BP20337 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB3BP20337 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
RAB3BP20337 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB3BP20337 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RAB3BP20337 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB3BP20337 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB3BP20337 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB3BP20337 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB3BP20337 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RAB3BP20337 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
RAB3BP20337 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB3BP20337 AC012617.1-204ENST00000586340 2305 ntBASIC13.17□□□□□ -0.3
RAB3BP20337 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB3BP20337 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB3BP20337 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB3BP20337 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB3BP20337 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB3BP20337 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB3BP20337 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB3BP20337 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.17□□□□□ -0.3
RAB3BP20337 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB3BP20337 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB3BP20337 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB3BP20337 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB3BP20337 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB3BP20337 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB3BP20337 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.17□□□□□ -0.3
RAB3BP20337 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
RAB3BP20337 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB3BP20337 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.17□□□□□ -0.3
RAB3BP20337 RN7SL828P-201ENST00000607615 303 ntBASIC13.17□□□□□ -0.3
RAB3BP20337 AL133215.2-201ENST00000609242 977 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms