Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 CR383656.12-201ENST00000549567 513 ntBASIC15.13■□□□□ 0.01
HLA-DPA1P20036 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 AC025279.2-201ENST00000569730 653 ntBASIC15.13■□□□□ 0.01
HLA-DPA1P20036 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 GNRHR2-203ENST00000581100 1187 ntBASIC15.13■□□□□ 0.01
HLA-DPA1P20036 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 AC004466.1-201ENST00000599515 1080 ntBASIC15.13■□□□□ 0.01
HLA-DPA1P20036 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 IGHV3-72-202ENST00000621503 303 ntBASIC15.13■□□□□ 0.01
HLA-DPA1P20036 AC132938.4-201ENST00000623835 848 ntBASIC15.13■□□□□ 0.01
HLA-DPA1P20036 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 SALL4P5-201ENST00000419001 1760 ntBASIC15.13■□□□□ 0.01
HLA-DPA1P20036 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 AC003102.2-201ENST00000589195 1469 ntBASIC15.13■□□□□ 0.01
HLA-DPA1P20036 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 POM121L8P-201ENST00000417732 1281 ntBASIC15.12■□□□□ 0.01
HLA-DPA1P20036 C2orf27AP3-201ENST00000434123 579 ntBASIC15.12■□□□□ 0.01
HLA-DPA1P20036 POM121L9P-203ENST00000441984 1285 ntBASIC15.12■□□□□ 0.01
HLA-DPA1P20036 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 MESTP3-201ENST00000503460 968 ntBASIC15.12■□□□□ 0.01
HLA-DPA1P20036 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 BTNL10-201ENST00000595971 695 ntBASIC15.12■□□□□ 0.01
HLA-DPA1P20036 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 AL354718.3-201ENST00000616414 581 ntBASIC15.12■□□□□ 0.01
HLA-DPA1P20036 CR382287.1-201ENST00000623954 586 ntBASIC15.12■□□□□ 0.01
HLA-DPA1P20036 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HLA-DPA1P20036 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 LINC00552-201ENST00000625151 2579 ntBASIC15.11■□□□□ 0.01
HLA-DPA1P20036 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 AC092933.1-201ENST00000393644 945 ntBASIC15.11■□□□□ 0.01
HLA-DPA1P20036 TMEM14DP-201ENST00000422205 345 ntBASIC15.11■□□□□ 0.01
HLA-DPA1P20036 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms