Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 USP32P1-208ENST00000506594 1164 ntBASIC13.69□□□□□ -0.22
CD53P19397 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.69□□□□□ -0.22
CD53P19397 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.69□□□□□ -0.22
CD53P19397 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CD53P19397 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.69□□□□□ -0.22
CD53P19397 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.69□□□□□ -0.22
CD53P19397 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.69□□□□□ -0.22
CD53P19397 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.69□□□□□ -0.22
CD53P19397 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CD53P19397 MTHFR-210ENST00000641407 2387 ntBASIC13.69□□□□□ -0.22
CD53P19397 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.69□□□□□ -0.22
CD53P19397 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.69□□□□□ -0.22
CD53P19397 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.69□□□□□ -0.22
CD53P19397 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CD53P19397 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CD53P19397 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
CD53P19397 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.69□□□□□ -0.22
CD53P19397 AL133338.1-201ENST00000565695 1517 ntBASIC13.69□□□□□ -0.22
CD53P19397 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CD53P19397 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CD53P19397 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.69□□□□□ -0.22
CD53P19397 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CD53P19397 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CD53P19397 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.68□□□□□ -0.22
CD53P19397 AC067750.1-201ENST00000608826 6545 ntBASIC13.68□□□□□ -0.22
CD53P19397 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.68□□□□□ -0.22
CD53P19397 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
CD53P19397 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD53P19397 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD53P19397 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
CD53P19397 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CD53P19397 FO393414.2-201ENST00000405153 598 ntBASIC13.68□□□□□ -0.22
CD53P19397 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.68□□□□□ -0.22
CD53P19397 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.68□□□□□ -0.22
CD53P19397 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.68□□□□□ -0.22
CD53P19397 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD53P19397 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.68□□□□□ -0.22
CD53P19397 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.68□□□□□ -0.22
CD53P19397 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.68□□□□□ -0.22
CD53P19397 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.68□□□□□ -0.22
CD53P19397 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.68□□□□□ -0.22
CD53P19397 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.68□□□□□ -0.22
CD53P19397 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CD53P19397 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
CD53P19397 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
CD53P19397 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CD53P19397 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.68□□□□□ -0.22
CD53P19397 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD53P19397 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.68□□□□□ -0.22
CD53P19397 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.68□□□□□ -0.22
CD53P19397 AC152010.1-201ENST00000415779 2006 ntBASIC13.68□□□□□ -0.22
CD53P19397 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD53P19397 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CD53P19397 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.67□□□□□ -0.22
CD53P19397 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CD53P19397 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 AC005840.4-201ENST00000541242 2494 ntBASIC13.67□□□□□ -0.22
CD53P19397 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
CD53P19397 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.67□□□□□ -0.22
CD53P19397 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.67□□□□□ -0.22
CD53P19397 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms