Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC117503.4-201ENST00000623229 1418 ntBASIC24.7■■□□□ 1.55
CFTRP13569 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CFTRP13569 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CFTRP13569 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CFTRP13569 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC24.7■■□□□ 1.54
CFTRP13569 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CFTRP13569 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC24.7■■□□□ 1.54
CFTRP13569 AC006987.1-201ENST00000413610 527 ntBASIC24.7■■□□□ 1.54
CFTRP13569 HNRNPA1P2-207ENST00000432375 960 ntBASIC24.7■■□□□ 1.54
CFTRP13569 AL161932.2-201ENST00000435436 679 ntBASIC24.7■■□□□ 1.54
CFTRP13569 AC092896.1-201ENST00000465850 380 ntBASIC24.7■■□□□ 1.54
CFTRP13569 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
CFTRP13569 IGHEP1-201ENST00000521393 651 ntBASIC24.7■■□□□ 1.54
CFTRP13569 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC24.7■■□□□ 1.54
CFTRP13569 AL009176.1-201ENST00000607876 650 ntBASIC24.7■■□□□ 1.54
CFTRP13569 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC24.7■■□□□ 1.54
CFTRP13569 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CFTRP13569 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC24.7■■□□□ 1.54
CFTRP13569 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC24.69■■□□□ 1.54
CFTRP13569 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC24.69■■□□□ 1.54
CFTRP13569 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CFTRP13569 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CFTRP13569 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
CFTRP13569 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CFTRP13569 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CFTRP13569 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC24.69■■□□□ 1.54
CFTRP13569 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC24.69■■□□□ 1.54
CFTRP13569 AC073210.1-201ENST00000414799 232 ntBASIC24.69■■□□□ 1.54
CFTRP13569 PGAM1P11-201ENST00000416729 680 ntBASIC24.69■■□□□ 1.54
CFTRP13569 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC24.69■■□□□ 1.54
CFTRP13569 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
CFTRP13569 PDXDC2P-206ENST00000534700 1315 ntBASIC24.69■■□□□ 1.54
CFTRP13569 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC24.69■■□□□ 1.54
CFTRP13569 AL359091.4-201ENST00000610052 409 ntBASIC24.69■■□□□ 1.54
CFTRP13569 AL391005.1-201ENST00000623953 2435 ntBASIC24.69■■□□□ 1.54
CFTRP13569 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CFTRP13569 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CFTRP13569 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC24.68■■□□□ 1.54
CFTRP13569 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC24.68■■□□□ 1.54
CFTRP13569 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC24.68■■□□□ 1.54
CFTRP13569 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CFTRP13569 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CFTRP13569 TMBIM7P-203ENST00000641617 1718 ntBASIC24.68■■□□□ 1.54
CFTRP13569 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CFTRP13569 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC24.68■■□□□ 1.54
CFTRP13569 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CFTRP13569 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
CFTRP13569 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC24.68■■□□□ 1.54
CFTRP13569 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CFTRP13569 RN7SL375P-201ENST00000492442 298 ntBASIC24.68■■□□□ 1.54
CFTRP13569 EEF1GP8-201ENST00000506566 1154 ntBASIC24.68■■□□□ 1.54
CFTRP13569 AC113347.2-201ENST00000512350 279 ntBASIC24.68■■□□□ 1.54
CFTRP13569 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC24.68■■□□□ 1.54
CFTRP13569 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC24.68■■□□□ 1.54
CFTRP13569 MIR4265-201ENST00000582152 99 ntBASIC24.68■■□□□ 1.54
CFTRP13569 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC24.68■■□□□ 1.54
CFTRP13569 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC24.68■■□□□ 1.54
CFTRP13569 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC24.68■■□□□ 1.54
CFTRP13569 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC24.68■■□□□ 1.54
CFTRP13569 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CFTRP13569 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC24.68■■□□□ 1.54
CFTRP13569 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CFTRP13569 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CFTRP13569 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CFTRP13569 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CFTRP13569 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CFTRP13569 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CFTRP13569 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CFTRP13569 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
CFTRP13569 FKBP4P8-201ENST00000610931 1369 ntBASIC24.67■■□□□ 1.54
CFTRP13569 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC24.67■■□□□ 1.54
CFTRP13569 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CFTRP13569 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CFTRP13569 AC022080.1-201ENST00000366255 781 ntBASIC24.67■■□□□ 1.54
CFTRP13569 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CFTRP13569 AC023141.7-201ENST00000430646 407 ntBASIC24.67■■□□□ 1.54
CFTRP13569 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC24.67■■□□□ 1.54
CFTRP13569 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC24.67■■□□□ 1.54
CFTRP13569 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC24.67■■□□□ 1.54
CFTRP13569 RN7SL288P-201ENST00000490496 291 ntBASIC24.67■■□□□ 1.54
CFTRP13569 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC24.67■■□□□ 1.54
CFTRP13569 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC24.67■■□□□ 1.54
CFTRP13569 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CFTRP13569 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC24.67■■□□□ 1.54
CFTRP13569 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CFTRP13569 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC24.67■■□□□ 1.54
CFTRP13569 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC24.67■■□□□ 1.54
CFTRP13569 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
CFTRP13569 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CFTRP13569 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CFTRP13569 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CFTRP13569 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CFTRP13569 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CFTRP13569 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CFTRP13569 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC24.67■■□□□ 1.54
CFTRP13569 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC24.67■■□□□ 1.54
CFTRP13569 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CFTRP13569 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CFTRP13569 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC24.66■■□□□ 1.54
CFTRP13569 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms