Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
DEFA4P12838 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.27□□□□□ -0.44
DEFA4P12838 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
DEFA4P12838 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
DEFA4P12838 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
DEFA4P12838 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
DEFA4P12838 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
DEFA4P12838 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
DEFA4P12838 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.27□□□□□ -0.44
DEFA4P12838 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.27□□□□□ -0.44
DEFA4P12838 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
DEFA4P12838 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
DEFA4P12838 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
DEFA4P12838 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
DEFA4P12838 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
DEFA4P12838 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
DEFA4P12838 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
DEFA4P12838 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
DEFA4P12838 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.27□□□□□ -0.45
DEFA4P12838 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
DEFA4P12838 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.27□□□□□ -0.45
DEFA4P12838 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.27□□□□□ -0.45
DEFA4P12838 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.27□□□□□ -0.45
DEFA4P12838 KRT18P43-201ENST00000469825 1281 ntBASIC12.27□□□□□ -0.45
DEFA4P12838 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.27□□□□□ -0.45
DEFA4P12838 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.27□□□□□ -0.45
DEFA4P12838 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.27□□□□□ -0.45
DEFA4P12838 AC015910.1-201ENST00000579400 975 ntBASIC12.27□□□□□ -0.45
DEFA4P12838 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.27□□□□□ -0.45
DEFA4P12838 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.27□□□□□ -0.45
DEFA4P12838 AC015911.4-201ENST00000588022 1070 ntBASIC12.27□□□□□ -0.45
DEFA4P12838 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.27□□□□□ -0.45
DEFA4P12838 AL158211.3-201ENST00000607385 239 ntBASIC12.27□□□□□ -0.45
DEFA4P12838 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.27□□□□□ -0.45
DEFA4P12838 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.27□□□□□ -0.45
DEFA4P12838 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
DEFA4P12838 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
DEFA4P12838 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
DEFA4P12838 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
DEFA4P12838 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.27□□□□□ -0.45
DEFA4P12838 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.27□□□□□ -0.45
DEFA4P12838 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
DEFA4P12838 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
DEFA4P12838 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
DEFA4P12838 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
DEFA4P12838 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
DEFA4P12838 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
DEFA4P12838 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
DEFA4P12838 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.27□□□□□ -0.45
DEFA4P12838 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.27□□□□□ -0.45
DEFA4P12838 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
DEFA4P12838 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
DEFA4P12838 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.27□□□□□ -0.45
DEFA4P12838 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
DEFA4P12838 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.27□□□□□ -0.45
DEFA4P12838 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
DEFA4P12838 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
DEFA4P12838 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.27□□□□□ -0.45
DEFA4P12838 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
DEFA4P12838 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.26□□□□□ -0.45
DEFA4P12838 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.26□□□□□ -0.45
DEFA4P12838 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
DEFA4P12838 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
DEFA4P12838 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.26□□□□□ -0.45
DEFA4P12838 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.26□□□□□ -0.45
DEFA4P12838 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.26□□□□□ -0.45
DEFA4P12838 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 TREML5P-201ENST00000421694 576 ntBASIC12.26□□□□□ -0.45
DEFA4P12838 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.26□□□□□ -0.45
DEFA4P12838 METTL21AP1-201ENST00000438852 635 ntBASIC12.26□□□□□ -0.45
DEFA4P12838 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.26□□□□□ -0.45
DEFA4P12838 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.26□□□□□ -0.45
DEFA4P12838 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.26□□□□□ -0.45
DEFA4P12838 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.26□□□□□ -0.45
DEFA4P12838 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.26□□□□□ -0.45
DEFA4P12838 AL512361.1-201ENST00000554200 418 ntBASIC12.26□□□□□ -0.45
DEFA4P12838 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.26□□□□□ -0.45
DEFA4P12838 AF228730.6-201ENST00000641497 218 ntBASIC12.26□□□□□ -0.45
DEFA4P12838 AC084121.3-201ENST00000641716 218 ntBASIC12.26□□□□□ -0.45
DEFA4P12838 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DEFA4P12838 AC087499.5-201ENST00000452760 1342 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms