Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19.26■□□□□ 0.67
MS4A1P11836 AC011474.4-201ENST00000623523 2076 ntBASIC19.26■□□□□ 0.67
MS4A1P11836 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC19.26■□□□□ 0.67
MS4A1P11836 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A1P11836 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A1P11836 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A1P11836 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A1P11836 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MS4A1P11836 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A1P11836 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A1P11836 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A1P11836 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
MS4A1P11836 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC19.25■□□□□ 0.67
MS4A1P11836 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A1P11836 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MS4A1P11836 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A1P11836 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
MS4A1P11836 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A1P11836 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A1P11836 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A1P11836 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
MS4A1P11836 USP4-203ENST00000415188 1454 ntTSL 3 BASIC19.25■□□□□ 0.67
MS4A1P11836 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC19.25■□□□□ 0.67
MS4A1P11836 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A1P11836 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC19.25■□□□□ 0.67
MS4A1P11836 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
MS4A1P11836 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.25■□□□□ 0.67
MS4A1P11836 ACTBP8-201ENST00000403258 1108 ntBASIC19.25■□□□□ 0.67
MS4A1P11836 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A1P11836 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A1P11836 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC19.25■□□□□ 0.67
MS4A1P11836 ELK1P1-201ENST00000485699 580 ntBASIC19.25■□□□□ 0.67
MS4A1P11836 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.25■□□□□ 0.67
MS4A1P11836 KRT18P25-201ENST00000508931 1278 ntBASIC19.25■□□□□ 0.67
MS4A1P11836 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.25■□□□□ 0.67
MS4A1P11836 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.25■□□□□ 0.67
MS4A1P11836 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
MS4A1P11836 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.25■□□□□ 0.67
MS4A1P11836 RN7SL204P-201ENST00000582831 262 ntBASIC19.25■□□□□ 0.67
MS4A1P11836 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.25■□□□□ 0.67
MS4A1P11836 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.25■□□□□ 0.67
MS4A1P11836 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
MS4A1P11836 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A1P11836 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MS4A1P11836 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A1P11836 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC19.25■□□□□ 0.67
MS4A1P11836 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A1P11836 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MS4A1P11836 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A1P11836 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A1P11836 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A1P11836 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A1P11836 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A1P11836 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A1P11836 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
MS4A1P11836 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A1P11836 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC19.24■□□□□ 0.67
MS4A1P11836 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC19.24■□□□□ 0.67
MS4A1P11836 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A1P11836 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC19.24■□□□□ 0.67
MS4A1P11836 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A1P11836 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.24■□□□□ 0.67
MS4A1P11836 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A1P11836 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
MS4A1P11836 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.24■□□□□ 0.67
MS4A1P11836 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A1P11836 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A1P11836 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC19.24■□□□□ 0.67
MS4A1P11836 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A1P11836 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
MS4A1P11836 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC19.24■□□□□ 0.67
MS4A1P11836 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC19.24■□□□□ 0.67
MS4A1P11836 LRRC59-203ENST00000576448 1531 ntBASIC19.24■□□□□ 0.67
MS4A1P11836 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
MS4A1P11836 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A1P11836 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC19.24■□□□□ 0.67
MS4A1P11836 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
MS4A1P11836 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A1P11836 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
MS4A1P11836 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A1P11836 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
MS4A1P11836 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A1P11836 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MS4A1P11836 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC19.23■□□□□ 0.67
MS4A1P11836 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MS4A1P11836 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MS4A1P11836 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MS4A1P11836 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms